Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30551
(615 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 199 1e-51
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 199 1e-51
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 199 1e-51
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 199 1e-51
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 199 1e-51
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 89 2e-18
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 89 2e-18
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 32 0.26
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 30 1.4
At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 2.4
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 29 3.2
At4g25370.1 68417.m03650 Clp amino terminal domain-containing pr... 29 3.2
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 4.3
At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarit... 28 4.3
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 5.7
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 28 5.7
At5g38030.1 68418.m04581 MATE efflux family protein similar to r... 27 7.5
At2g34910.1 68415.m04286 expressed protein 27 7.5
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 27 7.5
At3g26590.1 68416.m03319 MATE efflux family protein similar to r... 27 9.9
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si... 27 9.9
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 27 9.9
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 199 bits (486), Expect = 1e-51
Identities = 95/144 (65%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 284
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 285 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQPKLF 461
+AV+I+ + A +Y L+ G+ HL +GLA +GL+AG AI IVGDA VR AQQPKLF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 462 VGMILILIFAEVLGLYGLIVAIYL 533
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 272
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 273 YGLVVAVLIA 302
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 199 bits (486), Expect = 1e-51
Identities = 95/144 (65%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 284
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 285 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQPKLF 461
+AV+I+ + A +Y L+ G+ HL +GLA +GL+AG AI IVGDA VR AQQPKLF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 462 VGMILILIFAEVLGLYGLIVAIYL 533
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 272
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 273 YGLVVAVLIA 302
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 199 bits (486), Expect = 1e-51
Identities = 95/144 (65%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 284
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 285 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQPKLF 461
+AV+I+ + A +Y L+ G+ HL +GLA +GL+AG AI IVGDA VR AQQPKLF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 462 VGMILILIFAEVLGLYGLIVAIYL 533
VGMILILIFAE L LYGLIV I L
Sbjct: 131 VGMILILIFAEALALYGLIVGIIL 154
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 272
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 273 YGLVVAVLIA 302
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 199 bits (486), Expect = 1e-51
Identities = 95/144 (65%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 284
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 285 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQPKLF 461
+AV+I+ + A +Y L+ G+ HL +GLA +GL+AG AI IVGDA VR AQQPKLF
Sbjct: 73 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 132
Query: 462 VGMILILIFAEVLGLYGLIVAIYL 533
VGMILILIFAE L LYGLIV I L
Sbjct: 133 VGMILILIFAEALALYGLIVGIIL 156
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 272
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 88 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 147
Query: 273 YGLVVAVLIA 302
YGL+V ++++
Sbjct: 148 YGLIVGIILS 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 199 bits (486), Expect = 1e-51
Identities = 95/144 (65%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 284
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 285 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQPKLF 461
+AV+I+ + A +Y L+ G+ HL +GLA +GL+AG AI IVGDA VR AQQPKLF
Sbjct: 72 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 131
Query: 462 VGMILILIFAEVLGLYGLIVAIYL 533
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 272
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 273 YGLVVAVLIA 302
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = +3
Query: 111 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 290
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 84
Query: 291 VLIAGALQEPANYPLY------KGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQP 452
+++ L+ + +Y G+ +G+ V F+ L G + I+G + AQ
Sbjct: 85 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
Query: 453 KLFVGMILILIFAEVLGLYGLIVAIYL 533
LFV +++I IF LGL+G+IV I +
Sbjct: 145 TLFVKILVIEIFGSALGLFGVIVGIIM 171
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = +3
Query: 111 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 290
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 82
Query: 291 VLIAGALQEPANYPLY------KGFIHLGAGLAVRFSGLAAGFAISIVGDASVRGTAQQP 452
+++ L+ + +Y G+ +G+ V F+ L G + I+G + AQ
Sbjct: 83 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 142
Query: 453 KLFVGMILILIFAEVLGLYGLIVAIYL 533
LFV +++I IF LGL+G+IV I +
Sbjct: 143 TLFVKILVIEIFGSALGLFGVIVGIIM 169
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 353 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 207
VD +V G+ G+ LE + + D D ++ HD +D HD HH
Sbjct: 283 VDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHDHDHHHH 331
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 527 DGDDKSVKTQYFSENKNKNHSDE*LRLLSSTTHACISHD-AYGETGSQTRESYSQTSTQV 351
DG+D S +T E +N++ D + + T + S D + + S + S S +S+
Sbjct: 246 DGEDSSSETDE-EEEENQDSEDNNTKD-NVTVESLSSEDPSSSSSSSSSSSSSSSSSSSD 303
Query: 350 DEPFVKGVVG 321
DE +VK VVG
Sbjct: 304 DESYVKEVVG 313
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPV--VMAGIIAIYG 278
PFFG+M A + S L A A I R ++I+ SII V++G + Y
Sbjct: 467 PFFGLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYS 526
Query: 279 LVVAVL 296
V ++
Sbjct: 527 SVAKII 532
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 433 RTLASPTMLMAKPAARPENLTAKPAPK 353
RT ASPT + P PE + P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
>At4g25370.1 68417.m03650 Clp amino terminal domain-containing
protein contains Pfam profile: PF02861 Clp amino
terminal domain
Length = 238
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Frame = -3
Query: 502 PNTSAKIRIRIIPTNNLGC*AVP--RTLASPTMLMAKPAARPENLTAKPAPKWMNPL*RG 329
P TS+ + +++ T VP R L S + ++ P A+PEN ++ PKW +
Sbjct: 34 PLTSSLLGKKLLATQPSHRCFVPKLRCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKS 93
Query: 328 *LAGSWRAPAIR---TATTRP*MAIIPAMTTGMIDFMISSGL 212
G A ++ T T M I+ T+ + F+ +G+
Sbjct: 94 LAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGV 135
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 502 VFTDLSSPSTCTQNKRPEHTPLPSP 576
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarity
to SP|Q13454 N33 protein {Homo sapiens}; contains Pfam
profile PF04756: OST3 / OST6 family
Length = 346
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 345 FIHLGAGLAVRFSGLAAGFAISIVG--DASVRGTAQQPKLFVGMILILIFAEVLGLYGLI 518
F + G+G+ + G A GF ++VG A V + K LI++ A + + +
Sbjct: 264 FFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNITAQRLIMLLALFISFWAVK 323
Query: 519 VAIYL 533
+YL
Sbjct: 324 KVVYL 328
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -2
Query: 404 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 225
G+ E+ S+Q+ +P + + ++ N H Q VD NN DDR++ D
Sbjct: 8 GQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVD-NNNNDDDRDNLSGD 66
Query: 224 QLRP 213
P
Sbjct: 67 DHEP 70
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -2
Query: 491 SENKNKNHSDE*LRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLL 312
+ + S + L + + C S D+ ET + + S + + P +K +L+
Sbjct: 944 NRGNGSDESHDCLEIDPTQFDTCSSDDS-SETSGEKQVDKSVKPSTLHSPVLKN---YLI 999
Query: 311 EGT-SNQDSHDQTVDGNNTRHDDRNDRLH 228
+ T SN DS ++ N +D DRL+
Sbjct: 1000 DATTSNDDSTSASMTQKNPEEEDWKDRLY 1028
>At5g38030.1 68418.m04581 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family; putative
multidrug efflux protein NorM - Vibrio parahaemolyticus,
EMBL:AB010463
Length = 498
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 84 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 251
EN+ I G FGVM + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTAVILSLLYIF 147
Query: 252 MAGIIAIYGLVVAV 293
A I+A G A+
Sbjct: 148 AAPILAFIGQTPAI 161
>At2g34910.1 68415.m04286 expressed protein
Length = 288
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 496 TSAKIRIRIIPTNNLGC*AVPRTLASPTMLMAK 398
TS + R+R T + C A PRT +P +L A+
Sbjct: 244 TSPQRRVRFSTTTSDSCPASPRTCITPRLLKAR 276
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 27.5 bits (58), Expect = 7.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 134 CYHLQRLGSCLWNCQVRNWYC 196
C++L + + LW+C+ +N YC
Sbjct: 328 CHYLSCIPTSLWSCKSQNVYC 348
>At3g26590.1 68416.m03319 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 500
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 84 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 251
EN+ + G FG+M + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVVAGFSFGIMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTALILSLLYIF 147
Query: 252 MAGIIAIYGLVVAVLIAGAL 311
A I+A G A+ A +
Sbjct: 148 AAPILASIGQTAAISSAAGI 167
>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
thermoamyloliquefaciens]; contains Pfam profile: PF01055
Glycosyl hydrolases family 31
Length = 991
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2
Query: 596 SIEARSTGDGSGVCSGRLFCVQV 528
SIEARS G GSG S RL C++V
Sbjct: 864 SIEARSVGAGSGGFS-RLVCLRV 885
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 348 IHLGAGLAVRFSGLAA-GFAISIVGDAS---VRGTAQQPKLFVGMILILIF 488
+ GAGL + + G ++ + D + +G A QP+L V ++L++IF
Sbjct: 241 LSFGAGLLGSLAYMRMLGNSVDAMADGARGVAKGAANQPRLLVPVVLVMIF 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,650,804
Number of Sequences: 28952
Number of extensions: 327441
Number of successful extensions: 1005
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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