Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30549
         (463 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   9.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 297 CPASVHNGGTSSLAQLLSGAGTSRS 223
           C  S+H       A ++SG  TS S
Sbjct: 329 CVLSLHCAAVGGSANIMSGCSTSTS 353


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 278 MVAPRRWLSSYPVQVLPEASVPSQHLHQTE 189
           M+    W      +  P   +  QHLHQ++
Sbjct: 89  MIHRPNWWHELETKFNPHHEIKLQHLHQSK 118


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 241 TG*ELSQRRGATIVDTSWTRRSIRSLSAPLGRCSAVSW 354
           T   L+  +  + +D SW   S  S    L R   +SW
Sbjct: 361 TSLSLASAQTLSELDLSWNSISSLSHGGQLARFKCLSW 398


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 36  PHRRQPLVRYRPYK 77
           PH+ QPL+R   +K
Sbjct: 208 PHKFQPLLRLPKFK 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,342
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)