Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30549
(463 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_59587| Best HMM Match : HhH-GPD (HMM E-Value=1e-09) 30 1.1
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_19476| Best HMM Match : Extensin_2 (HMM E-Value=0.014) 29 1.9
SB_9456| Best HMM Match : OTU (HMM E-Value=3.1e-18) 29 2.5
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_13731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4) 27 5.7
SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31) 27 5.7
SB_11695| Best HMM Match : CHASE3 (HMM E-Value=1) 27 5.7
SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_22030| Best HMM Match : MutS_V (HMM E-Value=1e-15) 27 7.6
SB_56951| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_5767| Best HMM Match : Gal_Lectin (HMM E-Value=7.4e-08) 27 7.6
SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_55493| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 27 10.0
SB_41578| Best HMM Match : Apc15p (HMM E-Value=2.4) 27 10.0
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 27 10.0
SB_48373| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_36846| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 27 10.0
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 27 10.0
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 30.3 bits (65), Expect = 0.81
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -2
Query: 354 PGYGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSAP 202
P YG P Q+ P A H GG S + + S+R+Q +P
Sbjct: 533 PSYGRGGPTTTVQQQPPPTGEAPAHMGGAPSYGRQSPAGSSQESVRSQPSP 583
>SB_59587| Best HMM Match : HhH-GPD (HMM E-Value=1e-09)
Length = 300
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 386 RQRQFRSYLCDQDTALHLPSGADSERMLRRVQLVSTMVAPRRWLSSYP-VQVLPEASV 216
R +R+Y +QD + + SE ML++ Q+ + + RW+ ++P ++ L AS+
Sbjct: 47 RSLPWRAYATEQDANIRAYAVWVSEIMLQQTQVATVVDYYNRWMKNWPSLEALARASL 104
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 231 KYLHRIGAEPTTRCHHCGH*LDTAEHTLAVCPAWEVQRRILVAKIGPELSLPGVVASM 404
K+ G +P T CH CG +AEH V P + +LV G LP +VA +
Sbjct: 289 KFTQNKGGKPKTACHRCG----SAEHD--VLPLIG-ETEVLVEYEGQSAKLPLIVAKV 339
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 ANDEVPPLWTLAGHGGAYARCLP-RLGGAAPYPGRKDRTGIVAAWRRGVDAWR*RVLEGY 433
A D VPP TL G G A A P GAA PG A + R +GY
Sbjct: 1196 AFDTVPPQRTLRGQGEANAAFEPDEEEGAAAAPGHCRVMEQAEAGTEDKECGR-PTPDGY 1254
Query: 434 AQLLRVHHL 460
A L R+H++
Sbjct: 1255 AGLCRMHYI 1263
>SB_19476| Best HMM Match : Extensin_2 (HMM E-Value=0.014)
Length = 366
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 399 TPRRQAATIPVLSLRP-GYGAAPPKRGRQRAYAPP 298
+P+R A PV S R GY PP+R + A PP
Sbjct: 97 SPQRDAGYAPVPSQRDAGYAPVPPQRDAKYAPVPP 131
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 396 PRRQAATIPVLSLRP-GYGAAPPKRGRQRAYAPP 298
P+R A PV S R GY PP+R + A PP
Sbjct: 296 PQRDAGYAPVPSQRDAGYAPVPPQRDAKYASVPP 329
>SB_9456| Best HMM Match : OTU (HMM E-Value=3.1e-18)
Length = 1311
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 420 TRHRQASTPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPPCP 292
T H A +RQ+ + V P G+ PPK+ R + A P P
Sbjct: 690 TEHHAAVMQKRQSGSTTVKKT-PEKGSPPPKQVRDKQVASPVP 731
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Frame = -2
Query: 411 RQASTPRRQAATIP---VLSLRPGYGAAPPKR--GRQRAYAPPCPASVHNGGTSSLAQLL 247
R +S P ++ + VLS +PPKR + Y P + TSS A
Sbjct: 842 RSSSDPPKERPKVDPAAVLSRSCSEPRSPPKRRTSSEAFYTEGLPLAPSTSLTSSSAY-- 899
Query: 246 SGAGTSRSIRAQSAPAPDGR*GVLGHDSPSHQSLGKPPRRSVDPT*GWPTAS 91
S G + + S P+ + D+ S+ P R DP G+P +S
Sbjct: 900 STEGLASGSESGSCPSVEASAEAKDCDNNSYSESDSPRREYSDPMRGYPNSS 951
>SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 230 PEASVPSQHLHQTEGEAFSATIHPVIKVWVNRLDGP*TP 114
P+ S+ +QHL +++ +A T H + V R+ P P
Sbjct: 773 PQGSISAQHLAESDEQAAEQTAHEPAREKVERITSPEPP 811
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 354 PGYGAAPPKRG-RQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSA 205
PG AAPP APP P + GG SLA L+ A +S R ++A
Sbjct: 184 PGAPAAPPAPPFGGPPSAPPPPPAPPVGGGGSLADQLAAAKLRKSSRNEAA 234
>SB_13731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = -3
Query: 449 LAEVEHSLPXLVTAKHRRHDARQRQFRSYLCDQDTALHLPSGAD-------SERMLRRVQ 291
L +++H++ + T + RRHD R+FR + D H D + ++R V
Sbjct: 126 LGDMDHTMFLVKTTRLRRHDRHDRRFRHRVDRHDVNDHRQHRHDRYINDYKTVEIVRFVS 185
Query: 290 LVSTMVAPRRW 258
+ S + R W
Sbjct: 186 IASDTIRIRHW 196
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 447 RRS*A*PSXTRHRQASTPRRQAATIPVLSLRPGYGAAPPKRGRQRAYAPP 298
RRS + + HR++ +PR + P R A+PP+R R+R +PP
Sbjct: 837 RRSASGSDSSPHRRSESPRDRRRRSP--EHRRRREASPPRRDRKRYDSPP 884
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 429 PSXTRHRQASTPRRQAATIPVLSLRPGYGAAPPKRGRQR-AYAP 301
P R R+AS PRR R +PP R R+R +Y+P
Sbjct: 862 PEHRRRREASPPRRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSP 905
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 354 PGYGAAPPKRGRQRAYAPPCPASVHNGGTS 265
PG+ P RGR+ PP P NGG +
Sbjct: 267 PGHPGPPGVRGRRGKRGPPGPPGPPNGGAT 296
>SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4)
Length = 770
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 230 PEASVPSQHLHQTEGEAFSATIHPVIKVWVNRLDGP*TP 114
P+ S +QHL +++ +A T H + V R+ P P
Sbjct: 189 PQGSTSAQHLAESDEQAAEQTAHEPAREKVERITSPEPP 227
>SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)
Length = 708
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 293 GHGGAYARCLPRLGGAAPYPGRKDRTG 373
GHGG+ A+ GGA YPG +G
Sbjct: 642 GHGGSQAKAGGMWGGARGYPGTGRESG 668
>SB_11695| Best HMM Match : CHASE3 (HMM E-Value=1)
Length = 562
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 33 TPHRRQPLVRYRPYKFESWSRRLANLTWGLRTVEAVYPD 149
TPH + L+ YR + E WSR N+ G TVE + PD
Sbjct: 280 TPHSNRALLEYRTHNIE-WSR---NIFVGYFTVE-IKPD 313
>SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 33 TPHRRQPLVRYRPYKFESWSRRLANLTWGLRTVEAVYPD 149
TPH + L+ YR + E WSR N+ G TVE + PD
Sbjct: 763 TPHSNRALLEYRTHNIE-WSR---NIFVGYFTVE-IKPD 796
>SB_22030| Best HMM Match : MutS_V (HMM E-Value=1e-15)
Length = 166
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Frame = -1
Query: 229 PKHPCPVSTCTRRK--------VRRSRPRFTQSSKSG*TASTVRRPHVRLA-NRLDHDSN 77
P+H + CT + + R+ PR+ + K+G S V + +R++ N L + SN
Sbjct: 84 PRHASNMKNCTEKSLVLNEEIGISRNPPRYASNMKNGTEKSLVLKNEIRMSRNPLQYASN 143
Query: 76 L 74
+
Sbjct: 144 M 144
>SB_56951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 230 PEASVPSQHLHQTEGEAFSATIHPVIKVWVNRLDGP*TP 114
P+ S +QHL +++ +A T H + V R+ P P
Sbjct: 500 PQGSTSAQHLAESDEKAAGQTAHEPAREKVERITSPEPP 538
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 357 RPGYGAAPPKRGRQRAYAPPCPAS---VHNGGTSSLAQLLS 244
RPG PP+R R PP P+S +G T+ +Q L+
Sbjct: 1750 RPGPETEPPRRSRAPPPRPPPPSSRGHSRSGSTAGSSQALT 1790
>SB_5767| Best HMM Match : Gal_Lectin (HMM E-Value=7.4e-08)
Length = 504
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 222 CFGKYLHRIGAEPTTRCHHCG 284
C G Y++ +G PT R +CG
Sbjct: 83 CGGFYVYHLGRTPTCRLRYCG 103
>SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1933
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 393 RRQAATIPVLSLRPGYGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRA 214
+ + AT V +R G+G PP+RG + ++ + GT S +G SR
Sbjct: 972 KSEEATDAVPKMRGGFGVPPPRRGSNGLSS----SNTSDSGTDSSR---GSSGDSRPRGG 1024
Query: 213 QSAPA-PDGR*GVLGHDSPSHQSLG 142
+SAP P + V ++ P G
Sbjct: 1025 RSAPVRPSPKVTVPSNEVPRDDESG 1049
>SB_55493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 228 GKYLHRIGAEPTTRCHHCGH*LDTAEHTLA 317
GK R+ EP CH+ GH L +A A
Sbjct: 90 GKDGLRVNDEPVDHCHYVGHVLSSANSKAA 119
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 209 DWARMLREVPAPD 247
DW+R+LRE P PD
Sbjct: 1276 DWSRLLRERPVPD 1288
>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 654
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 345 GAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSAP 202
G+APPK Q PP V++ TS+ A + T RS+ + AP
Sbjct: 592 GSAPPKNSLQVHMPPPSVQPVYH-HTSAFAPIAPSPAT-RSVGSSPAP 637
>SB_41578| Best HMM Match : Apc15p (HMM E-Value=2.4)
Length = 391
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 303 EHTLAVCPAWEVQRRILVAKIGPELSLP 386
E T+ V W+ ++R L+ I PE+ P
Sbjct: 277 EETVVVLGVWQTEKRGLIDPINPEIHRP 304
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 363 SLRPGYGAAPPKRGRQRAYAPPCPASVHNGG 271
S+ P A PP + RQR ++PP P S GG
Sbjct: 479 SMSPPVDAPPPAK-RQRVFSPP-PESYRYGG 507
>SB_48373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 177 LGHDSPSHQSLGKPPRRSVDPT*GWPTASTTIRIY 73
+G+ S + S PPR S+ P PT+++ ++
Sbjct: 161 IGNSSKTTMSAANPPRESLSPVEAIPTSTSVCTLF 195
>SB_36846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 440 VEHSLPXLVTAKHRRHDARQRQFRSYLCDQDTALH 336
V+H++ + T + RRHD R+FR + D H
Sbjct: 26 VDHTMFLVKTTRLRRHDRHDRRFRHRVDRHDVNDH 60
>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4275
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 396 PRRQAATIPVLSLRP-GYGAAPPKRGRQRAYAPP 298
P+R A PV R GY PP+R + A PP
Sbjct: 77 PQRDAGYAPVPPQRDAGYAPVPPQRDAKYAPVPP 110
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 396 PRRQAATIPVLSLRP-GYGAAPPKRGRQRAYAPP 298
P+R A PV R GY PP+R + A PP
Sbjct: 121 PQRDAGYAPVPPQRDAGYAPVPPQRDAKYAPVPP 154
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 377 QFRSYLCDQDTALHL---PSGADSER 309
+ + ++C +DTA+H PSG +SER
Sbjct: 1166 KIKQWICSEDTAVHTQPSPSGNNSER 1191
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 26.6 bits (56), Expect = 10.0
Identities = 25/93 (26%), Positives = 31/93 (33%)
Frame = -2
Query: 351 GYGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSAPAPDGR*GVLG 172
G G PP G + + P P + GG GAG Q P P G G G
Sbjct: 542 GQGGGPPPPGAGQGWGQPPPGAGQGGGPPP-----PGAG-------QGGPPPPGA-GQEG 588
Query: 171 HDSPSHQSLGKPPRRSVDPT*GWPTASTTIRIY 73
P G PP G P + + +Y
Sbjct: 589 PPPPGAGQGGGPPPPGAGQGWGLPPPGSGLHLY 621
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -2
Query: 357 RPGYGAAPPKRGRQRAYAPPCPASVHNGGTSSLAQLLSGAGTSRSIRAQSAPAP 196
+PGYGA P + G +A PP G + QL + A Q P P
Sbjct: 792 QPGYGAPPTQGGPPQAQPPPHAPP----GQAHYQQLGAAAPNQGGYHPQQPPPP 841
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,693,880
Number of Sequences: 59808
Number of extensions: 383144
Number of successful extensions: 1454
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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