Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30540
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 215 2e-56
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 38 0.004
SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2) 27 0.11
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 31 0.86
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 30 1.1
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 30 1.1
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_42197| Best HMM Match : rve (HMM E-Value=0.017) 29 2.6
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 4.6
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 27 8.0
SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) 27 8.0
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 215 bits (526), Expect = 2e-56
Identities = 98/160 (61%), Positives = 117/160 (73%)
Frame = +2
Query: 80 DNLTALLYKPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMI 259
DNL A+L+ +DLRLVQ V + M VGICGSDVHYW+ G G FVL PM+
Sbjct: 5 DNLAAVLHGIDDLRLVQ----------VQISMHTVGICGSDVHYWKHGCIGDFVLTAPMV 54
Query: 260 MGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVHG 439
+GHE+SGV+ +G V +L GDRVAIEPG PCR C +CK GRY+LC M FCATPP HG
Sbjct: 55 LGHESSGVICAVGEGVSDLKEGDRVAIEPGTPCRTCSYCKKGRYNLCAKMNFCATPPYHG 114
Query: 440 NLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKR 559
+L R Y H ADFC+KLPDHV++EEGALLEPL+VG+HAC R
Sbjct: 115 SLCRRYNHQADFCYKLPDHVSLEEGALLEPLSVGVHACNR 154
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 85.4 bits (202), Expect = 3e-17
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Frame = +2
Query: 116 LRLVQTPIPEISD-DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAK 292
L ++ P+P +S+ EV++++ GIC D+ + G + +++GHE SGVV+
Sbjct: 60 LSVITRPVPHVSNPSEVIVKVAYSGICDRDLQILE----GELPAAKCVVLGHEFSGVVSD 115
Query: 293 IGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPV--HGNLVRYYKHA 466
+GS VKN+++GDRV + P C C+ C+ G+ H C + V +G +Y +
Sbjct: 116 VGSDVKNVSIGDRVVVNPNSSCNTCKACRRGQPHFCEKGGTGSAIGVWKNGGWTQYARVH 175
Query: 467 ADFCFKLPDHVTMEEGALLEPLAVGIH 547
A +P V++++ AL EP++ +H
Sbjct: 176 APNIHIVPPQVSLKQAALCEPISCVLH 202
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 74.5 bits (175), Expect = 5e-14
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 110 NDLRLVQTPIPEI-SDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 286
N L ++ P P + S +V++++ + G+D+H + G + +I+GH+ G+V
Sbjct: 10 NHLSVITRPTPHVQSPRDVVVKIAYSAVSGTDLHVLE----GRIDCAKSIILGHQFVGIV 65
Query: 287 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC--PDMIFCATPPVHGNLVRYYK 460
+IG+ V++++VGDRV I P C C+FC G+ HLC +G ++ +
Sbjct: 66 KEIGADVQHVSVGDRVVINPLTSCGICDFCLKGQPHLCKVEGKNTAIGIKRNGGWAQFCR 125
Query: 461 HAADFCFKLPDHVTMEEGALLEPLA 535
+A LP VT E+ EP++
Sbjct: 126 LSAKNVIPLPHQVTFEQALFSEPMS 150
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 38.3 bits (85), Expect = 0.004
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = +2
Query: 56 FRASDMATDNLTALLYKPN---DLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQ 226
FR ++ +++ A+L+ P + + P P++ + EVL+R+ + +D +KG
Sbjct: 18 FRYYAISAESMKAVLFTPGGPESMYIGDAPRPKLKETEVLIRVHFTALNRADT-LQRKGS 76
Query: 227 CGHFVLEEPMIMGHEASGVVAKIGSKVK-NLTVGDRV-AIEPGVPCRYCEFCKTGRYHLC 400
E I+G E SG+V ++GS GD+V A+ PG Y EF H+
Sbjct: 77 YPP-PPGESEILGLEVSGIVEELGSACNLGWRKGDKVMALVPG--GGYAEFAAVQESHVM 133
Query: 401 P 403
P
Sbjct: 134 P 134
>SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2)
Length = 289
Score = 27.5 bits (58), Expect(2) = 0.11
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 251 PMIMGHEASGVVAKIGSKVKNLTVGDRVAI 340
P + G+E G V K+G +VK + GD V +
Sbjct: 102 PAVGGNEGCGQVIKMGKEVKGVKEGDFVIL 131
Score = 25.0 bits (52), Expect(2) = 0.11
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 437 GNLVRYYKHAADFCFKLPDHVTMEEGALL 523
G+ RY+ + D K+PD++++E A L
Sbjct: 137 GSWTRYHVLSEDQVIKVPDYISVEMAATL 165
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 363 TASSVRQDDTTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+++ T+Y PT S P P YT T S +ST +S+ T
Sbjct: 105 TSTTSYTSTTSYTPTTSYTPTPSYTSTPSYTSSTSYTPTTSYTCT 149
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 342 SMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKCP 229
S++T P V+F T PI + +PE + + S +T P
Sbjct: 1010 SLSTAEPQVKFTTAAPISSESPETTAAVTTASPTTDAP 1047
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 30.7 bits (66), Expect = 0.86
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 363 TASSVRQDDTTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+++ T+Y PT S P P YT T+S ++T +S+ T
Sbjct: 144 TSTTSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTPT 188
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 363 TASSVRQDDTTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT*PWKKERYWSPS 533
T+++ T+Y PT S P YT T+S +T +S+ T + ++P+
Sbjct: 174 TSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPT 230
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+Y PT S P P YT T+S ++T +S+ T
Sbjct: 132 TSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTST 167
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT*PWKKERYWSPS 533
T+Y PT S P P YT T+S +T +S+ T + ++P+
Sbjct: 42 TSYTPTPSYTPTPSYTPTTSYTPTTSYTPTTSYTPTPSYTPTTSYTPT 89
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+Y PT S P P YT T S ++T +S+ T
Sbjct: 108 TSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPT 143
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT*PWKKERYWSPS 533
T+Y PT S P P YT T+S + +S+ T + ++P+
Sbjct: 66 TSYTPTTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPT 113
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 393 TYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT*PWKKERYWSPS 533
+Y PT S P P YT T+S +T +S+ T + ++P+
Sbjct: 79 SYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPT 125
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 338 IEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVH 436
+ PG C TG H+C D+ FCA P H
Sbjct: 1773 VGPGRASCTCRVGFTGNGHICNDIDFCAPNPCH 1805
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 104 KPNDLRLVQTPIPEISDDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGV 283
KP + ++ P+ EV +++ G+C +D Y G + P I+GHE G+
Sbjct: 14 KPLSIETIEVAPPKAH--EVRIKILATGVCHTDA-YTLSGVDPEGLF--PCILGHEGGGI 68
Query: 284 VAKIGSKV 307
V +G V
Sbjct: 69 VESVGEGV 76
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +3
Query: 63 RPTWPQIT*P--------LCCTNQMICVWYKHRSLKYLMMRSCCAWTAWVSAGQMSTTGR 218
RP WP+ P + T I V K LK +MRS + W S+ + S +
Sbjct: 545 RPLWPESELPSDVTMAAIVVATANPIAVTVKPYFLKIALMRSLSGF--WFSSSRFSRSSS 602
Query: 219 RVNADTSCWKNQ*SWDTKLQE*WPRSV 299
++ S +++ SW W RSV
Sbjct: 603 SISDSLSSLRSRASWRLLSDISWTRSV 629
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 59 RASDMATDNLTALLYKPNDLRLVQTPIPE 145
R+ ++ TD+ T L P D+R+ QTP PE
Sbjct: 674 RSYEIETDDGTTLRRNPADIRMQQTPSPE 702
>SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 VLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGV 352
V E P+I G + SGVV K G +V+ G V P V
Sbjct: 65 VEEFPLICGRDFSGVVVKTGRRVRRFRPGMEVWGTPSV 102
>SB_42197| Best HMM Match : rve (HMM E-Value=0.017)
Length = 602
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +2
Query: 422 TPPVHGNLVRYYKHAADF--CFKL-PDHVTMEEGA---LLEPLAVGIH 547
TP G LV YK+ + FK+ P H+T+EEGA + P +V +H
Sbjct: 108 TPLTKGKLVNSYKNRFEGLGAFKMRPYHITLEEGAEPVIHPPSSVPVH 155
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -1
Query: 447 TRFPCTGGVAQKIM-SGHRWYRPVLQNSQYRHGTPGSMATRSPTVRF---LTFEPILATT 280
T P AQ+++ + W + Q QY+ P + T+ PTV+ T + +AT
Sbjct: 507 TTVPSQETTAQQMLKAAAAWQQATGQTLQYQPAAPSAYQTQQPTVQATVQATGQQEVATE 566
Query: 279 PEASCPMIIGS 247
P+ P+ G+
Sbjct: 567 PQTVQPLATGA 577
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+Y T S P P YT T+S T+T +S+ T
Sbjct: 48 TSYTSTTSYTPTPSYTPTTSYTTTTSYTSTTSYTTT 83
>SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1041
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +2
Query: 422 TPPVHGNLVRYYKHAADF--CFKL-PDHVTMEEGA---LLEPLAVGIH 547
TP G LV YK + FK+ P H+T+EEGA + P +V +H
Sbjct: 243 TPLTKGKLVNSYKDRFEGLGAFKMRPYHITLEEGAEPVIHPPRSVPVH 290
>SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 239 VLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 334
V E P+I G + SGVV K G +V+ G V
Sbjct: 137 VEEFPLICGRDFSGVVVKTGRRVRRFRPGMEV 168
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 375 QNSQYRHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKCP 229
++++YRH T + R VR++TF L PE++ S TK P
Sbjct: 83 KHTEYRHET----SYRKTDVRYVTFTGPLGQEPESNANYFTSESPTKRP 127
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 375 QNSQYRHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKCP 229
++++YRH T + R VR++TF L PE++ S TK P
Sbjct: 3269 KHTEYRHET----SYRKTDVRYVTFTGPLGQEPESNANYFTSESPTKRP 3313
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+Y PT S P P YT T S +T +S+ T
Sbjct: 84 TSYTPTTSYTPTPSYTPTPSYTCTTSYTSTTSYTPT 119
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 390 TTYAPT*SSAPRPQYTETSSDITSTQPIFASSFLIT 497
T+Y PT S P P YT T+S ++T +S+ T
Sbjct: 90 TSYTPTPSYTPTPSYTCTTSYTSTTSYTPTTSYTPT 125
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 453 YLTRFPCTGGVAQKIMSGHRWYRPVLQNSQYRHGTPGSMATRSPTVRFLTFEPIL 289
Y TR T + ++M H W P L N Y T G++ R+PT EP L
Sbjct: 200 YGTRTYGTPRMNPELMEPHVW-NPNLWNPTYGTPTYGTLTHRAPTYGTSRMEPHL 253
>SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15)
Length = 490
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 348 PGSMATRSPTVRFLTFEPILA-TTPE-ASCPMIIGSSSTKC 232
P + T+SP T P+ TTP +SCP+ G SS KC
Sbjct: 234 PTTQPTKSPVRAGRTACPVSPLTTPHISSCPLSPGVSSPKC 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,589,949
Number of Sequences: 59808
Number of extensions: 441961
Number of successful extensions: 1387
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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