Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30539
         (790 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9M2M7 Cluster: Putative uncharacterized protein F28O9....    33   6.2  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   8.2  
UniRef50_P41231 Cluster: P2Y purinoceptor 2; n=30; Euteleostomi|...    33   8.2  

>UniRef50_Q9M2M7 Cluster: Putative uncharacterized protein F28O9.50;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F28O9.50 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 439

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 165 LRSQYSYNGCRTLQTETHYCFMAEISSAVLPCGLRRRPTTSKIVISRNIRQPALNSGT 338
           L S+    GC+  + +   CFM E   AV+   LR     S +VI+ + + P+ NS T
Sbjct: 332 LTSRRDRCGCKPTKVDVKRCFMLEFDRAVIIQELREAGVFSSVVIAAH-KSPSKNSST 388


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = +2

Query: 53  SVFFLL*WVDNLKTHLVLSGY 115
           S F LL WVD L  HLVLSGY
Sbjct: 152 SRFLLLRWVDELTAHLVLSGY 172


>UniRef50_P41231 Cluster: P2Y purinoceptor 2; n=30;
           Euteleostomi|Rep: P2Y purinoceptor 2 - Homo sapiens
           (Human)
          Length = 377

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = -2

Query: 531 LLVPVFISCVRLMSLCKFSVSIYIFL*KRQPWNSS 427
           +L+PV    V ++ LC  +V++YIFL + + WN+S
Sbjct: 34  VLLPVSYGVVCVLGLCLNAVALYIFLCRLKTWNAS 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,042,940
Number of Sequences: 1657284
Number of extensions: 13657971
Number of successful extensions: 26394
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26391
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)