Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30527
(760 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 452 e-127
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 449 e-127
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 448 e-126
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 447 e-126
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 446 e-126
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 446 e-126
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 439 e-123
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 439 e-123
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 439 e-123
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 414 e-116
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 355 2e-98
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 305 1e-83
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 249 2e-66
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 170 1e-42
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 162 3e-40
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 118 4e-27
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 107 1e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 6e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 103 1e-22
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 67 1e-11
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 67 1e-11
At5g43500.2 68418.m05318 expressed protein 35 0.051
At5g43500.1 68418.m05319 expressed protein 35 0.051
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 33 0.27
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 32 0.36
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 32 0.36
At1g10620.1 68414.m01204 protein kinase family protein contains ... 32 0.36
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 32 0.48
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 32 0.48
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 31 0.63
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 31 0.63
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.63
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.63
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 31 0.63
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 31 1.1
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 31 1.1
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 31 1.1
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 30 1.5
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 30 1.5
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 30 1.5
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 30 1.5
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 1.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 1.9
At3g28790.1 68416.m03593 expressed protein 30 1.9
At1g32190.1 68414.m03959 expressed protein 30 1.9
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 30 1.9
At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels ... 29 2.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 2.5
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 3.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 3.4
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 3.4
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 3.4
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 3.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.4
At5g27860.1 68418.m03342 expressed protein 29 4.4
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 29 4.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 4.4
At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family... 28 5.9
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 28 7.7
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 7.7
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 7.7
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 28 7.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 452 bits (1114), Expect = e-127
Identities = 211/228 (92%), Positives = 220/228 (96%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA
Sbjct: 185 RDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETA 232
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 449 bits (1107), Expect = e-127
Identities = 210/228 (92%), Positives = 219/228 (96%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETS 232
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 448 bits (1104), Expect = e-126
Identities = 209/228 (91%), Positives = 219/228 (96%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETS 232
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 447 bits (1101), Expect = e-126
Identities = 211/230 (91%), Positives = 218/230 (94%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATAAS 759
RDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA S
Sbjct: 185 RDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKS 234
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 446 bits (1100), Expect = e-126
Identities = 209/228 (91%), Positives = 217/228 (95%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV PEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTD LMKILTERGYSFTTTAEREIVRDIKEKL Y+ALD+EQE+ TA
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETA 232
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 446 bits (1100), Expect = e-126
Identities = 209/228 (91%), Positives = 217/228 (95%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV PEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTD LMKILTERGYSFTTTAEREIVRDIKEKL Y+ALD+EQE+ TA
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETA 232
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 439 bits (1081), Expect = e-123
Identities = 201/228 (88%), Positives = 218/228 (95%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 439 bits (1081), Expect = e-123
Identities = 201/228 (88%), Positives = 218/228 (95%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 439 bits (1081), Expect = e-123
Identities = 201/228 (88%), Positives = 218/228 (95%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 414 bits (1020), Expect = e-116
Identities = 186/230 (80%), Positives = 214/230 (93%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 249
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 250 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQI 429
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 430 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 609
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 185
Query: 610 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATAAS 759
RDLT+YL KI+ ERGY++TT+AEREIVRDIKEKL Y+A+D+EQEM A +
Sbjct: 186 RDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATT 235
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 355 bits (873), Expect = 2e-98
Identities = 163/220 (74%), Positives = 190/220 (86%)
Frame = +1
Query: 85 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 264
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 265 KYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQIMFETF 444
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 445 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 624
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTD 178
Query: 625 YLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEM 744
YL++I+TERGY++TT+AEREIVRDIKEKL YVALD+EQEM
Sbjct: 179 YLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEM 218
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 305 bits (750), Expect = 1e-83
Identities = 141/187 (75%), Positives = 165/187 (88%)
Frame = +1
Query: 193 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPV 372
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRV PEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 373 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 552
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 553 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDF 732
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDY 177
Query: 733 EQEMATA 753
EQEM A
Sbjct: 178 EQEMEKA 184
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 249 bits (609), Expect = 2e-66
Identities = 109/221 (49%), Positives = 156/221 (70%), Gaps = 2/221 (0%)
Frame = +1
Query: 85 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 258
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 259 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQIMFE 438
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 439 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 618
+N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186
Query: 619 TDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQE 741
T YL+ +L+ RGY+ TA+ E VR+IKEKL Y++ D+++E
Sbjct: 187 TAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRE 227
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 170 bits (413), Expect = 1e-42
Identities = 95/246 (38%), Positives = 139/246 (56%), Gaps = 26/246 (10%)
Frame = +1
Query: 82 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 207
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 208 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLL 378
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 379 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVS 543
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 544 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 723
H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE Y
Sbjct: 185 HVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTC 244
Query: 724 LDFEQE 741
D +E
Sbjct: 245 SDIVKE 250
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 162 bits (393), Expect = 3e-40
Identities = 87/217 (40%), Positives = 128/217 (58%), Gaps = 22/217 (10%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 219
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 220 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEE 363
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 364 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 543
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G +
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGST 184
Query: 544 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 654
P+++GY L A++ L G LTD L+K L +G
Sbjct: 185 TISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 118 bits (284), Expect = 4e-27
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 10/233 (4%)
Frame = +1
Query: 85 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 264
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 265 KYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKANREKMTQIMFETF 444
+ PI+ G + N D +IW H F + L + P +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 445 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 594
++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 595 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEMATA 753
+DL G+ T+YL ++++ R S E +V D KEKL +V+LD +++ A
Sbjct: 182 IDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLA 232
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 107 bits (256), Expect = 1e-23
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Frame = +1
Query: 85 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 264
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 265 -----KYPIEHGIVTNWDDMEKIWHHTFYNELRVXPE--EHPVLLTEAPLNPKANREKMT 423
+ P + +V ++ ME I + F + L +HP+L+TE NP +R KM
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAF-DRLGANGSGIDHPILITECACNPVQSRSKMA 136
Query: 424 QIMFETFNTPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 588
+++FET+ PA+ + A S L+ + GIVL G +H++P +G +
Sbjct: 137 ELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGS 196
Query: 589 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVALDFEQEM 744
R ++ G +TDYL ++L+ + ++ E D+K + Y+A D+ E+
Sbjct: 197 SRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (250), Expect = 6e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +1
Query: 70 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 204
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 205 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLT 381
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 382 EAPLNPKANREK 417
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 103 bits (248), Expect = 1e-22
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Frame = +1
Query: 82 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 258
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 259 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXP-EEHPVLLTEAPLNPKANREKMTQIMF 435
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 615
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTE 172
Query: 616 LT 621
LT
Sbjct: 173 LT 174
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 66.9 bits (156), Expect = 1e-11
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Frame = +1
Query: 328 TFYNELRVXPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 654
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 655 YSFTTTAEREIVRDIKEKLXYVALDFEQEMA 747
SF + VR +KEKL YVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 66.9 bits (156), Expect = 1e-11
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Frame = +1
Query: 328 TFYNELRVXPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 654
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 655 YSFTTTAEREIVRDIKEKLXYVALDFEQEMA 747
SF + VR +KEKL YVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +1
Query: 364 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 543
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 544 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 639
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +1
Query: 364 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 543
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 544 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 639
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 206 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 69
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 443 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTP 586
+T PP T +P+ P + T P+VPPV+ P T++P P T +LTP
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPPV-ITIPPPTLTP 92
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
S PP +PS P T PV PP TP+ SPTP P + + TPS
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
S PP +PS P T PV PP TP+ SPTP P + + TPS
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
PP +PS P T PV PP TP+ SPTP P + + TPS
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 550
S PP +PS P T PV PP TP+ SPTP
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP 167
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PYPSTRDTHSLTPS 589
S PP +PS P P P S +P V+PT P PS +TP+
Sbjct: 182 SPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSPPDVTPT 231
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 550
S PP SP PC + P PPV + P T SP P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP 554
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCW-----TPATVSPTPYPSTRDTHSLTP 586
+T+PP TSP P S T+ PP + P +P P P + S+TP
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPSITP 92
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 414 EDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTP 578
ED +V + Q+ +RR SRA A V + + R+ + H HL +R P
Sbjct: 134 EDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRP 188
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
S PP +SPS P PP +P++ P P PS+ SL+PS
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 84
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
S PP +SPS P PP +P++ P P PS+ SL+PS
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 133
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 543 PHRTHLRGIRTPSRHPASGLGRSRPHRLPHEDPHRARLLVHYHRRAGNRS*HQGEAXLRR 722
PHR RG R P +G R+ + P R++ +Y R +R + E R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQ-REREREKDR 263
Query: 723 SRLRAGDGHR 752
R R D +R
Sbjct: 264 ERERGRDRYR 273
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 543 PHRTHLRGIRTPSRHPASGLGRSRPHRLPHEDPHRARLLVHYHRRAGNRS*HQGEAXLRR 722
PHR RG R P +G R+ + P R++ +Y R +R + E R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQ-REREREKDR 271
Query: 723 SRLRAGDGHR 752
R R D +R
Sbjct: 272 ERERGRDRYR 281
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 431 CSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPYPSTRDTHSLT 583
C+ S+ PP S C R TR PVV P TP+ P PS + +T
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPIT 435
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDT 571
S PP T PS P S T P PP S +P SP P P T T
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST 566
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +2
Query: 440 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP-----YPSTRDTHSLTP 586
+S+ PP SP+ CTRP PP P SP P Y S HS P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPP 571
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 31.5 bits (68), Expect = 0.63
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Frame = +2
Query: 326 IPSTMSSVSXPRNIPSFSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 505
IPST S+ S P P S H T P SPS P + P
Sbjct: 81 IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPT--PKKSPSPPPTPSLPPPA 138
Query: 506 PPVSCWTPATVSPTPY---PSTRDTHSLTPS 589
P S TP+ PTP P HS +PS
Sbjct: 139 PKKSPSTPSLPPPTPKKSPPPPPSHHSSSPS 169
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
PP PS P + PV+PP+ + P+ + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
PP PS P + PV+PP+ + P+ + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
PP PS P + PV+PP+ + P+ + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 562
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 464 SPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
SPS P S + P P TP+T S P P + + SL PS
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 446 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTP 550
T PP +P+ P P PPVS P T SP P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPYPSTR-DTHSLTPS 589
+T PP SP P + PPV+ PA ++ P P P+T+ D+ S +PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 446 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTP 550
T PP +P+ P P PPVS P T SP P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPYPSTR-DTHSLTPS 589
+T PP SP P + PPV+ PA ++ P P P+T+ D+ S +PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 455 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHS 577
PC SP KP + +PV P PA +PTP PS + S
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPS 136
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +2
Query: 440 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP--YPSTRDTHSLTP 586
HS PP SP P P PPV P SP P Y HS P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPP 591
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 PCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPYPST 562
P +PS P P P S TP+T +P TP PST
Sbjct: 279 PTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPST 315
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 431 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCW 523
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTR 565
PP +P KP ++ PV PPVS V P YP T+
Sbjct: 94 PPTKAPVKPPTK--PPVKPPVSPPAKPPVKPPVYPPTK 129
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTR 565
PP +P KP ++ PV PPVS V P YP T+
Sbjct: 166 PPTKAPVKPPTK--PPVKPPVSPPAKPPVKPPVYPPTK 201
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 434 SKHSTRPPCTSPSKPCSR------CTRPVVPPVSCWTPATVSPTPYP 556
+K +PP + P+KP + PV PPVS T V+P YP
Sbjct: 176 TKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYP 222
>At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels
between the genome sequence and the cDNA prevent
identical translations from being annotated; the basis
for this is under investigation.
Length = 87
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPSCV 595
PP SPS T PP C+TP + T S T+ LTP V
Sbjct: 33 PPVESPSPVV---TPTAEPPARCFTPYSSQRTHSGSNNSTNRLTPDHV 77
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 440 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 589
HS PP SP P + P PPV P V+P P ++ ++ TPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 443 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTP 586
+T PP +P P + PP + PAT P+ PS D + +P
Sbjct: 41 ATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPADVPTASP 87
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 449 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPSCV 595
+PP T P T PVV P + P PTP P + TP +
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 562
PP +P P T PVV P + P PTP P T
Sbjct: 212 PPVITPPTP----TPPVVTPPTPTPPVVTPPTPTPPT 244
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 462 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGLGRSR 614
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 167
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 462 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGLGRSR 614
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 178
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 462 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGLGRSR 614
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 208
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 229 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKAN 408
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 409 REK 417
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 229 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLNPKAN 408
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 409 REK 417
REK
Sbjct: 225 REK 227
>At5g27860.1 68418.m03342 expressed protein
Length = 177
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +3
Query: 417 DDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPAS 596
D D R + RH RR+ +++VR R + RRR + S +S
Sbjct: 15 DSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDSSDSSYSDSSSESS 74
Query: 597 GLG--RSRPHRLPHEDPHRA----RLLVHYHRRAGNRS*HQGE 707
+SR H+ HE P +A R H H+R NR +GE
Sbjct: 75 DSEHEKSRRHK-KHEKPKKAKDKERSKSHRHKRHKNRERKKGE 116
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 431 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWT--PATVSPTPYPST 562
CS PP P + T+PV PPV S +T P+T TP P +
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPVFSAFTTEPSTAPFTPPPES 161
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 431 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWTPATVSPTPYPSTRD 568
C + PPC P P P +PP PA P P P T D
Sbjct: 70 CPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
>At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family
protein identical to proline-rich protein 2 [Arabidopsis
thaliana] gi|7620011|gb|AAF64549
Length = 321
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 449 RPPCTSPSKPC-SRCTRPVV-PPVSCWTPATVSP 544
+PP P KPC + +P+ PPV + P V P
Sbjct: 224 KPPVVIPKKPCPPKIHKPIYKPPVPIYKPPVVIP 257
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 446 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTP 586
TRP T+PS + T V PVS P +V+P+P + + + P
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSV-HPTSVAPSPVSACLTSEASKP 202
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 452 PPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPYPST 562
PP SPS P + T P PP + +P + +PT PST
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTD-PST 191
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 317 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 228
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g31510.1 68415.m03850 IBR domain-containing protein /
ARIADNE-like protein ARI7 (ARI7) identical to
ARIADNE-like protein ARI7 [Arabidopsis thaliana]
GI:29125028; contains similarity to Swiss-Prot:Q94981
ariadne-1 protein (Ari-1) [Drosophila melanogaster];
contains Pfam profile PF01485: IBR domain
Length = 562
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 470 SKPCSRCTRPVVPPVSCWTPATVSPTPY 553
SKPC RC RP+ C P Y
Sbjct: 292 SKPCPRCKRPIEKNQGCMHMTCTPPCKY 319
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,348,375
Number of Sequences: 28952
Number of extensions: 408768
Number of successful extensions: 1649
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -