Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30521
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.22 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    24   0.66 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.66 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.66 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   2.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.2  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 344 KTSLMTASFCVWTILF-ISSILTLVSASILAATPYPGTH 231
           KT L T  +C + ILF +S  + LV  + L  TP P T+
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPVTN 351


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 34  FSIWRVRPKVIQQLLAAEKRAAEKVSEARQAK 129
           F+ W    K +++LL  +K  AEK  EA   K
Sbjct: 41  FNFWGKYQKAVEKLLTEQKELAEK-EEAETLK 71


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 34  FSIWRVRPKVIQQLLAAEKRAAEKVSEARQAK 129
           F+ W    K +++LL  +K  AEK  EA   K
Sbjct: 201 FNFWGKYQKAVEKLLTEQKELAEK-EEAETLK 231


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 34  FSIWRVRPKVIQQLLAAEKRAAEKVSEARQAK 129
           F+ W    K +++LL  +K  AEK  EA   K
Sbjct: 201 FNFWGKYQKAVEKLLTEQKELAEK-EEAETLK 231


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 358 DIKPELHINYRLN*AKLLDLIHNLRLTN 441
           +++ E H N  L   + +++ H L LTN
Sbjct: 234 ELEKEFHFNRYLTRRRRIEIAHALCLTN 261


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 358 DIKPELHINYRLN*AKLLDLIHNLRLT 438
           +++ E H N  L   + +++  +LRLT
Sbjct: 197 ELEKEFHFNKYLTRRRRIEIAESLRLT 223


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 358 DIKPELHINYRLN*AKLLDLIHNLRLT 438
           +++ E H N  L   + +++  +LRLT
Sbjct: 197 ELEKEFHFNKYLTRRRRIEIAESLRLT 223


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 358 DIKPELHINYRLN*AKLLDLIHNLRLT 438
           +++ E H N  L   + +++  +LRLT
Sbjct: 197 ELEKEFHFNKYLTRRRRIEIAESLRLT 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,681
Number of Sequences: 336
Number of extensions: 1893
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)