Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30470
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 41 0.001
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 38 0.008
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 38 0.011
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7) 36 0.034
SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92) 34 0.14
SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_59169| Best HMM Match : Sre (HMM E-Value=3.3) 33 0.18
SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_49035| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 30 2.2
SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1) 30 2.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 30 2.2
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 29 3.0
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 29 3.0
SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16) 29 3.9
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 29 5.2
SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8) 28 6.8
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 28 9.0
SB_54230| Best HMM Match : EGF (HMM E-Value=0) 28 9.0
SB_43344| Best HMM Match : Pkinase (HMM E-Value=6.9e-08) 28 9.0
SB_9588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = -2
Query: 555 ITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALV 376
+T+ G T S + TA + VT+ +V +T ++ + L S V
Sbjct: 1754 LTTTSTGTLTSTHHTTHTSTETSTHVTTATETATEVTTATQVTTETAVSTAVQTLTSTHV 1813
Query: 375 TTIVTSKTALITLT-RITETGVAVT*TGISVTETRAAVARIIS 250
TT ++ A +TLT TET AV T + T T AVA + S
Sbjct: 1814 TTATNTRNATLTLTHHKTETSTAVAMTTVPHTVTTTAVALVNS 1856
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/100 (23%), Positives = 44/100 (44%)
Frame = -2
Query: 564 SKEITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALIS 385
+K T V T + S ++A T ++ V + V T+ A + T+ +
Sbjct: 1919 TKVATLTSTHVATTTSVAIETSTAIATSTHVTTQLNTQVVNSTSVAIATSTA-IATSTST 1977
Query: 384 ALVTTIVTSKTALITLTRITETGVAVT*TGISVTETRAAV 265
+ T T+ T + + T+T AVT T I++ ++ + V
Sbjct: 1978 HVTTQTNTAVTTSVVMATSTQTNTAVT-TSIAIAKSTSVV 2016
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = -2
Query: 552 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 373
T+ V T V+ + +VA T TA + T A + TT A+ +TA +++VT
Sbjct: 1163 TTTAAAVTASTASVVTKTATVAAATTTA---EKATTLTAAMVEATTTAAAVTASTASVVT 1219
Query: 372 TIV-TSKTALITLTRITETGVAVT*TGISVTETRAAVA 262
T + T + T T AVT + SV T A +A
Sbjct: 1220 TTAEKATTTTAAMVEATTTEAAVTASTASVVTTTATIA 1257
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -2
Query: 510 LVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTR 331
+V +++ + +T +VT+ A TT A+ +TA +++VTT T A T +
Sbjct: 1092 MVQAKAASSITTPLKTTVVAVTAAATTTAATTIAAAVTASTASVVTTTATVAAATTTAEK 1151
Query: 330 ITETGVAV---T*TGISVTETRAAV 265
T T A+ T T +VT + A+V
Sbjct: 1152 ATTTTAAMVKATTTAAAVTASTASV 1176
Score = 33.5 bits (73), Expect = 0.18
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = -2
Query: 564 SKEITSVGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEASLITA 394
+K TS+ + ET L+ + A VT +++++ S P KTT ++ A
Sbjct: 1060 AKTTTSIAK----ETISALMTVTASAEVTSEMISSSMVQAKAASSITTPLKTTVVAVTAA 1115
Query: 393 LISALVTTIVTSKTA-LITLTRITETGVAVT*TGISVTETRAAVAR 259
+ TTI + TA ++ T T A T T T T AA+ +
Sbjct: 1116 ATTTAATTIAAAVTASTASVVTTTATVAAATTTAEKATTTTAAMVK 1161
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = -2
Query: 513 VLVVSRSVARVTGTAALIS----GSVTSIARVP*KTTEASLITALISALVT---TIVTSK 355
V + SV T T A + + T+ A + TT A+ +TA +++VT T+ +
Sbjct: 1128 VTASTASVVTTTATVAAATTTAEKATTTTAAMVKATTTAAAVTASTASVVTKTATVAAAT 1187
Query: 354 TALITLTRITETGVAVT*TGISVTETRAAV 265
T T +T V T T +VT + A+V
Sbjct: 1188 TTAEKATTLTAAMVEATTTAAAVTASTASV 1217
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = -2
Query: 564 SKEITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALIS 385
+++ T++ + T V+ S A V T A + T+ A V TTEA+ +TA +
Sbjct: 1190 AEKATTLTAAMVEATTTAAAVTASTASVVTTTAE-KATTTTAAMVEATTTEAA-VTASTA 1247
Query: 384 ALVTTIVTSKTALIT 340
++VTT T ++ IT
Sbjct: 1248 SVVTTTATIASSTIT 1262
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = -2
Query: 558 EITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISAL 379
E T+ V T V+ + A T TAA++ + T A + AS++T +
Sbjct: 1202 EATTTAAAVTASTASVVTTTAEKATTT-TAAMVEATTTEAAVT---ASTASVVTTTATIA 1257
Query: 378 VTTIVTSKTALITLTRITETGVA 310
+TI T + I+ T + V+
Sbjct: 1258 SSTITTPSLSAISTTTASSVQVS 1280
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
Frame = -2
Query: 555 ITSVGRGVPVETGPVLVVSRSVARVTGTAAL-----ISGSVTSIARVP*KTTEASLITAL 391
+T T V + VT TAA ++ +VT+ T + +T
Sbjct: 227 VTVTATAATTVTATVTAATTVTVTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVT 286
Query: 390 ISALVTTIVTSKTALITLTRITETGVAVT*T-GISVTETRAAVA 262
+A VT IVT L +TET A T T +VT T A A
Sbjct: 287 ATATVTVIVTVTATLAVTVTVTETAAAATATVTATVTTTTTATA 330
Score = 33.5 bits (73), Expect = 0.18
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Frame = +2
Query: 245 ITEIILATAARVSVTEIPV*VTATPVSVIRVK-----VIRAVLEVTMVVTKADIRAV--- 400
+T + ATAA + VTAT + + V + A VT++VT AV
Sbjct: 247 VTVTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVTATATVTVIVTVTATLAVTVT 306
Query: 401 IREASVVFQGTRAMEVTDPDIRAAVPVTRATDLDTTNTGPVSTGTPRPT 547
+ E + T VT A T AT TT +T T T
Sbjct: 307 VTETAAAATATVTATVTTTTTATATATTTATATATTTATATATATATAT 355
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -2
Query: 552 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA---LISA 382
T+ + T +S +++ T T IS + T+I V TT + TA I+A
Sbjct: 93 TTTTTTITTTTTTTTTISTTISTTT-TTTTISTTTTTITAVIISTTTTTTSTANTTTITA 151
Query: 381 LVTTIVTSKTALITLTRITETGVAVT*TGISVT 283
+TT T+ T T+T IT T A T IS T
Sbjct: 152 TITTTTTTITITATITTITTTITATITTTISTT 184
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 504 VSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALV-TTIVTSKTALITLTRI 328
++ + +T TA + + + T A + TT S T I+A + TTI T+ T T+T
Sbjct: 153 ITTTTTTITITATITTITTTITATI---TTTISTTTPFITATISTTITTTITTTTTITTT 209
Query: 327 TETGVAVT*TGISVT 283
T T +T T I +T
Sbjct: 210 TTTIYTITTTIIIIT 224
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = -2
Query: 480 TGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTR--ITETGVAV 307
T T + + T+I TT ITA I+ + TTI + T I+ T IT T
Sbjct: 136 TTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTISTTTPFITATISTT 195
Query: 306 T*TGISVTETRAAVARIISVI 244
T I+ T T I I
Sbjct: 196 ITTTITTTTTITTTTTTIYTI 216
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/100 (27%), Positives = 46/100 (46%)
Frame = -2
Query: 555 ITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALV 376
+T+V T V + ++ VT AA ++ T+ A + TT A+ +T +A V
Sbjct: 607 VTTVATAAATVT-TVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTAAATLTTA-AATV 664
Query: 375 TTIVTSKTALITLTRITETGVAVT*TGISVTETRAAVARI 256
TT+ T+ L T+T T VT ++T A + +
Sbjct: 665 TTVTTAAATLTTVTTAAATLTTVTIAAATLTTAAATLTTV 704
>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
Length = 122
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = -2
Query: 513 VLVVSRSVARVTGTAALISGSVTSIARVP*K--TTEASLITALISALVTTIVTSKTALIT 340
+ ++ ++ +T +I+ +T+I + TT T +I+ ++TTI+T+ +IT
Sbjct: 2 ITTITITITMITTITVIITTMITTITVIITTMITTITITTTTIITTMITTIITTVIIIIT 61
Query: 339 LTRITETGVAVT*TGISVTETRAAVARIISVI 244
+T IT +T ++T + II+ I
Sbjct: 62 ITIITIITTIITTIITTITIITTIITTIITTI 93
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 510 LVVSRSVARVT-GTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLT 334
++++ + +T T +I+ +T+I ++IT +I+ ++TTI+T+ T + T+
Sbjct: 28 VIITTMITTITITTTTIITTMITTIITTVIIIITITIIT-IITTIITTIITTITIITTII 86
Query: 333 RITETGVAVT*T 298
T + T T
Sbjct: 87 TTIITTIITTIT 98
>SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLIT--ALISALVTTIVT 361
+ + T ++V ++++ T T + + ++ I + TT+ ++T A++ T +VT
Sbjct: 41 IVMTTLTIVVTTQTIVVTTQTIVVTTQTIVVITQTIVVTTQTIVVTTLAIVVTTQTIVVT 100
Query: 360 SKTALITLTRI---TETGVAVT*TGISVTETRAAVARIISV 247
++T ++T I T+T V T T + T+T + I V
Sbjct: 101 TQTIVVTTQTIVATTQTIVVTTLTIVMTTQTIVVTTQTIVV 141
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSK 355
+ V T ++V+++++ T T + + ++ + TT+ ++T +V T T
Sbjct: 62 IVVTTQTIVVITQTIVVTTQTIVVTTLAIVVTTQTIVVTTQTIVVTT--QTIVATTQTIV 119
Query: 354 TALITLTRITETGVAVT*TGISVTET 277
+T+ T+T V T T + T+T
Sbjct: 120 VTTLTIVMTTQTIVVTTQTIVVTTQT 145
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTT--IVT 361
+ + T +++ + ++ T T + + ++ + TT+ ++T ++T +VT
Sbjct: 20 IVLTTQTIVMTTLTIVMTTLTIVMTTLTIVVTTQTIVVTTQTIVVTTQTIVVITQTIVVT 79
Query: 360 SKTALITLTRI---TETGVAVT*TGISVTETRAAVARIISV 247
++T ++T I T+T V T T + T+T A + I V
Sbjct: 80 TQTIVVTTLAIVVTTQTIVVTTQTIVVTTQTIVATTQTIVV 120
>SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92)
Length = 425
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +2
Query: 248 TEIILATAARVSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQ 427
TE+ + T A T AT + V + EVT T ++ + A V
Sbjct: 247 TEVTMTTTATEVTTTTTAAEVATTTTAAEVTMTTTAAEVTTTTTATEV-TMTTTAKEVTT 305
Query: 428 GTRAMEVTDPDIRAAVPVTR-ATDLDTTNTGPVSTGT 535
T A EVT A V T AT++ TT T T T
Sbjct: 306 TTTAAEVTMTTTAAEVTTTTTATEVTTTTTAAEVTMT 342
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/90 (27%), Positives = 31/90 (34%)
Frame = +2
Query: 266 TAARVSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGTRAME 445
TAA V+ T VT T + V EVTM T ++ A V T A
Sbjct: 263 TAAEVATTTTAAEVTMTTTAA-EVTTTTTATEVTMTTTAKEVTTTTTAAEVTMTTTAAEV 321
Query: 446 VTDPDIRAAVPVTRATDLDTTNTGPVSTGT 535
T T A ++ T T T T
Sbjct: 322 TTTTTATEVTTTTTAAEVTMTTTAAEVTTT 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 TEIILATAAR-VSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVF 424
TE+ + T A+ V+ T VT T + V EVT T A++ A V
Sbjct: 15 TEVTMTTTAKEVTTTTTAAEVTMTTTAA-EVTTTTTATEVTTTTTAAEVTMTTTAAEVTM 73
Query: 425 QGTRAMEVTDPDIRAAV-PVTRATDLDTTNTGPVSTGT 535
T A E T A V T A + TT T T T
Sbjct: 74 T-TTATEATMTTTAAEVTTTTTAAKVTTTTTAAEVTMT 110
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 3/99 (3%)
Frame = +2
Query: 248 TEIILATAAR-VSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVF 424
TE+ + T A+ V+ T VT T + V EVT T A++ A V
Sbjct: 292 TEVTMTTTAKEVTTTTTAAEVTMTTTAA-EVTTTTTATEVTTTTTAAEVTMTTTAAEVTT 350
Query: 425 QGTRAMEVTDPDIRAAVPVTRATD--LDTTNTGPVSTGT 535
A E T A AT + T T +T T
Sbjct: 351 TTAAAAEATTTAAEATTTAAEATTTAAEATTTAAEATTT 389
>SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA--LISALVTTIVT 361
+ V T ++V ++++ T T + + ++ + TT+ ++T ++ T +VT
Sbjct: 90 IVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVT 149
Query: 360 SKTALITLTRI---TETGVAVT*TGISVTETRAAVARIISV 247
++T ++T I T+T V T T + T+T A + I V
Sbjct: 150 TQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIAVTTQTIVV 190
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA--LISALVTTIVT 361
+ V T ++V + ++A T T + + ++ TT+ ++T ++ +T +VT
Sbjct: 34 IVVTTQTIVVTTLAIAVTTQTIVVTTQTIVVTTLTIVVTTQTIVMTTQTIVMTTLTIVVT 93
Query: 360 SKTALITLTRITETGVAVT*TGISVTETRAAVARIISV 247
++T ++T T+T V T T + T+T + I V
Sbjct: 94 TQTIVVT----TQTIVVTTQTIVVTTQTIVVTTQTIVV 127
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA--LISALVTTIVT 361
+ V T +++ ++++ T T + + ++ + TT+ ++T ++ T +VT
Sbjct: 69 IVVTTQTIVMTTQTIVMTTLTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVT 128
Query: 360 SKTALITLTRI---TETGVAVT*TGISVTETRAAVARIISV 247
++T ++T I T+T V T T + T+T + I V
Sbjct: 129 TQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVV 169
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA--LISALVTTIVT 361
+ V T ++V ++++ T T + + ++ + TT ++T ++ T +VT
Sbjct: 48 IAVTTQTIVVTTQTIVVTTLTIVVTTQTIVMTTQTIVMTTLTIVVTTQTIVVTTQTIVVT 107
Query: 360 SKTALITLTRI---TETGVAVT*TGISVTETRAAVARIISV 247
++T ++T I T+T V T T + T+T + I V
Sbjct: 108 TQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVVTTQTIVV 148
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/98 (21%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -2
Query: 534 VPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITA--LISALVTTIVT 361
+ V T +++ ++++ T T + + ++ TT+ ++T ++ +T +VT
Sbjct: 13 IVVTTQTIVLTTQTIVVTTQTIVVTTQTIVVTTLAIAVTTQTIVVTTQTIVVTTLTIVVT 72
Query: 360 SKTALITLTRITETGVAVT*TGISVTETRAAVARIISV 247
++T ++T T+T V T T + T+T + I V
Sbjct: 73 TQTIVMT----TQTIVMTTLTIVVTTQTIVVTTQTIVV 106
>SB_59169| Best HMM Match : Sre (HMM E-Value=3.3)
Length = 447
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -2
Query: 522 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*----KTTEASLITALISALVTTIVTSK 355
T ++++ S +T +I+ S T I + TT+ + IT +I+ TT +TS
Sbjct: 181 TSITMIITTSTTDITSITMIITTSTTDITSITMIITTSTTDITSITMIITTTSTTDITSI 240
Query: 354 TALIT--LTRITETGVAVT*T 298
T +IT T IT + +T T
Sbjct: 241 TMIITTSTTDITSITMIITTT 261
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = -2
Query: 522 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*----KTTEASLITALISALVTTIVTSK 355
T ++++ S +T +I+ S T I + TT+ + IT +I+ TT +TS
Sbjct: 153 TSITMIITTSTTDITSITMIITTSTTDITSITMIITTSTTDITSITMIITTS-TTDITSI 211
Query: 354 TALITLTRITETGVAVT*TGISVTE 280
T +IT + T + + T S T+
Sbjct: 212 TMIITTSTTDITSITMIITTTSTTD 236
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = -2
Query: 522 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*K-TTEASLITALISALVT--TIVTSKT 352
T ++++ S +T +I+ S T I + TT + IT++ + T T +TSKT
Sbjct: 83 TNITMIITTSTTDITSITMIITTSTTDITSITMIITTSTTDITSITMTITTSTTDITSKT 142
Query: 351 ALIT--LTRITETGVAVT*TGISVT 283
+IT T IT + +T + +T
Sbjct: 143 MIITTSTTDITSITMIITTSTTDIT 167
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -2
Query: 513 VLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTI---VTSKTALI 343
+++ + S +T +I+ S T I + TT ++ I+ ++TT +TS T +I
Sbjct: 1 MIITTTSTTDITSITMIITTSTTDITSITIITTTSTTDITSITMIITTSTTDITSITMII 60
Query: 342 TLTRITETGVAVT*TGISVTE 280
T + T + + T S T+
Sbjct: 61 TTSTTDITSITMIITTTSTTD 81
Score = 31.1 bits (67), Expect = 0.97
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Frame = -2
Query: 630 LLLLVSTSRDHPKXXXXXXXXASKEITSVGRGVPVETGPV----LVVSRSVARVTGTAAL 463
+ ++++TS ++ +ITS+ + T + ++++ S +T +
Sbjct: 99 ITMIITTSTTDITSITMIITTSTTDITSITMTITTSTTDITSKTMIITTSTTDITSITMI 158
Query: 462 ISGSVTSIARVP*----KTTEASLITALISALVTTIVTSKTALIT--LTRITETGVAVT* 301
I+ S T I + TT+ + IT +I+ TT +TS T +IT T IT + +T
Sbjct: 159 ITTSTTDITSITMIITTSTTDITSITMIITTS-TTDITSITMIITTSTTDITSITMIITT 217
Query: 300 TGISVT 283
+ +T
Sbjct: 218 STTDIT 223
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = -2
Query: 513 VLVVSRSVARVTGTAALISGSVTSIARVP*----KTTEASLITALISALVTTIVTSKTAL 346
+++ + S +T +I+ S T I + TT+ IT +I TT +TS T +
Sbjct: 227 MIITTTSTTDITSITMIITTSTTDITSITMIITTTTTDDISITMIIITTSTTDITSITMI 286
Query: 345 ITLTR---ITETGVAVT*T 298
IT T I+ T + +T T
Sbjct: 287 ITTTTTDFISTTTICITTT 305
>SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = -2
Query: 510 LVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTR 331
+ + + +T T I+ ++T+ TT ITA IS +TT +T+ T T+T
Sbjct: 12 ITTTTTTITITATITTITTTITATITTTISTT-TPFITATISTTITTTITTTT---TITT 67
Query: 330 ITETGVAVT*TGISVT 283
T T +T T I +T
Sbjct: 68 TTTTIYTITTTIIIIT 83
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 399 TALISALVTTIVTSKTALITLTRITETGVAVT*TGISVT 283
T I+A +TT T+ T T+T IT T A T IS T
Sbjct: 5 TTTITATITTTTTTITITATITTITTTITATITTTISTT 43
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 459 SGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTR--ITETGVAVT*TGISV 286
+ + T+I TT ITA I+ + TTI + T I+ T IT T T I+
Sbjct: 2 TANTTTITATITTTTTTITITATITTITTTITATITTTISTTTPFITATISTTITTTITT 61
Query: 285 TETRAAVARIISVI 244
T T I I
Sbjct: 62 TTTITTTTTTIYTI 75
>SB_49035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 32.3 bits (70), Expect = 0.42
Identities = 26/93 (27%), Positives = 43/93 (46%)
Frame = +2
Query: 257 ILATAARVSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGTR 436
IL T + + VT+ + VT + + V + V + T++VT + I V
Sbjct: 94 ILVTDSTILVTDCTILVTDSTIPVTDSTI--PVTDSTILVTDSTIPVTDSTILVTDSTIP 151
Query: 437 AMEVTDPDIRAAVPVTRATDLDTTNTGPVSTGT 535
+ T P + +PVT +T L T +T PV+ T
Sbjct: 152 VTDSTIPVTDSTIPVTDSTILVTDSTIPVTDST 184
Score = 29.1 bits (62), Expect = 3.9
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +2
Query: 257 ILATAARVSVTE--IPV*VTATPVSVIRVKVIRAVLEVT-MVVTKADIRAVIREASVVFQ 427
IL T + VT+ IPV + PV+ + V + + VT + D + ++++
Sbjct: 101 ILVTDCTILVTDSTIPVTDSTIPVTDSTILVTDSTIPVTDSTILVTDSTIPVTDSTIPVT 160
Query: 428 GTRAMEVTDPDIR---AAVPVTRATDLDTTNTGPVSTGT 535
+ + VTD I + +PVT +T L T +T PV+ T
Sbjct: 161 DS-TIPVTDSTILVTDSTIPVTDSTILVTDSTIPVTDST 198
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 31.9 bits (69), Expect = 0.55
Identities = 34/163 (20%), Positives = 62/163 (38%)
Frame = -2
Query: 732 TH*SISTYYGVXIRT*STT*KMYLISIDLSYSFHLLLLVSTSRDHPKXXXXXXXXASKEI 553
TH + ST+ T + T + S+ ++ S + +VS A I
Sbjct: 462 THTATSTHVTTATSTDTLTSTAIVTSVMVTISTGVSQIVSWVTYTTTALVTMTTTAIASI 521
Query: 552 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 373
T+ + T A +T T I+ + ++ + +L + +
Sbjct: 522 TTTSTDIATSTLVTTETKTDTATLTTTRTDIASKTVYTTKTRTDVQTSTAVVSLTTTSTS 581
Query: 372 TIVTSKTALITLTRITETGVAVT*TGISVTETRAAVARIISVI 244
T T+K A T T +TET VT + T+T A++ I+ +
Sbjct: 582 TYATTKIATSTAT-LTETSTGVTTNTYTKTDTLTAISTSITTL 623
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Frame = -2
Query: 555 ITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALI---- 388
+T V T VLV S + T S VT+ T+ A + + ++
Sbjct: 435 VTDTATSTAVVTSTVLVASTRLLSTVKTHTATSTHVTTATSTDTLTSTAIVTSVMVTIST 494
Query: 387 --SALVTTIVTSKTALITLTRITETGVAVT*TGISVT 283
S +V+ + + TAL+T+T + T T I+ +
Sbjct: 495 GVSQIVSWVTYTTTALVTMTTTAIASITTTSTDIATS 531
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +2
Query: 287 TEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGTR-AMEVTDPDI 463
TE P A +V + V T A RE +V + T + +P
Sbjct: 625 TEAPDTTVAPETTVAPESTVAPETTVAPETTVAPEITASRETTVAPESTVWPVSTVEPKT 684
Query: 464 RAAVPVTRATDLDTTNTGPVSTGT 535
++PVT L TT+ GP T T
Sbjct: 685 TISLPVTTLVQLSTTSVGPSPTPT 708
>SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1)
Length = 268
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = -2
Query: 516 PVLVVSRSVARVTGTAALISGSVTSIARVP*KT-TEASLITALISALVTTIVTSKTALIT 340
P+ V+ + +T +I ++ I + T T ++IT +I+ ++ TI+ + T + T
Sbjct: 46 PIHVLKYIIIIITIIITIIITTIIIIITIIITTITIITIITIIITIIIITIIITITIITT 105
Query: 339 LTRITETGVAVT*TGIS-VTETRAAVARIISV 247
+T IT T +T I+ +T A+ II +
Sbjct: 106 ITIITITIAIITIITIAIITIITIAIFTIIII 137
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +2
Query: 287 TEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGTR-AMEVTDPDI 463
TE P A +V + V T A RE +V + T + +P
Sbjct: 574 TEAPDTTVAPETTVAPESTVAPETTVAPETTVAPEITASRETTVAPESTVWPVSTVEPKT 633
Query: 464 RAAVPVTRATDLDTTNTGPVSTGT 535
++PVT L TT+ GP T T
Sbjct: 634 TISLPVTTLVQLSTTSVGPSPTPT 657
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +2
Query: 287 TEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGTR-AMEVTDPDI 463
TE P A +V + V T A RE +V + T + +P
Sbjct: 2880 TEAPDTTVAPETTVAPESTVAPETTVAPETTVAPEITASRETTVAPESTVWPVSTVEPKT 2939
Query: 464 RAAVPVTRATDLDTTNTGPVSTGT 535
++PVT L TT+ GP T T
Sbjct: 2940 TISLPVTTLVQLSTTSVGPSPTPT 2963
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 455 PDIRAAVPVTRATDLDTTNTGPVSTGTPRP 544
P A++P T T DTT TG ST +P P
Sbjct: 934 PSAVASIPNTWETSADTTGTGNKSTTSPDP 963
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 392 RAVIREASVVFQGTRAMEVTDPDIRAAVPVTRATDLDTTNTGPVSTGT 535
RA + + S+ QG A++ T PD++A A+ + G STG+
Sbjct: 373 RAPMGQPSIQLQGVTAVDGTPPDLQAHEAACCASAAPSLTAGQASTGS 420
>SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16)
Length = 979
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 387 SALVTTIVTSKTALITLTRITETGVAVT*TGIS 289
SAL+TT +TS+ T++T G ++ TGIS
Sbjct: 483 SALLTTFITSEKCEFAKTQVTFLGQLISATGIS 515
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -2
Query: 483 VTGTAALISGSVTSIARVP*KTTEASLITALISA-LVTTIVTSKTALITL-TRITETGVA 310
+T T +I+ +T+I T ++IT I+ ++TT +T+ T+ T IT T +
Sbjct: 1055 ITTTTTIIT--ITNITTTINTTINTTIITTTITTTIITTTITTTIITTTITTTITTTIIT 1112
Query: 309 VT*TGISVTET 277
T T +T T
Sbjct: 1113 TTVTTTIITTT 1123
>SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 378 VTTIVTSKTALITLTR-ITETGVAVT*TGISVTETRAAVARIISVI 244
+TTI+T+ T +IT T IT T + + I +T T II +I
Sbjct: 746 ITTIITTNTIIITTTTIITTTTIIIIIIIIIITTTIITTTTIIIII 791
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -2
Query: 495 SVARVTGTAALIS----GSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTRI 328
+ A T TA+L + + S+A KTT ASL T A ++VT+ T + +
Sbjct: 620 TTAPETATASLATTAPEATTASLATTAPKTTTASLATTAPEATTASLVTTAPEATTASLL 679
Query: 327 TETGVAVT*TGISVTETRAAVA 262
T T T ++ T A A
Sbjct: 680 T-TAPETTTASLATTAPEATTA 700
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 28.7 bits (61), Expect = 5.2
Identities = 30/149 (20%), Positives = 63/149 (42%)
Frame = -2
Query: 723 SISTYYGVXIRT*STT*KMYLISIDLSYSFHLLLLVSTSRDHPKXXXXXXXXASKEITSV 544
+I+T Y + TT +++I +S ++ ++ ++ + ++ + T+V
Sbjct: 427 TITTNYTTIVTITITTNYTTIVTITISTNYTTIVTITITTNYTTIVTITIT--TNYTTTV 484
Query: 543 GRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIV 364
+ T +V+ ++ T T + T+I + T + +T TTI
Sbjct: 485 T--TTITTNYTTIVTTTITNYTTTVTFTITNYTTIVPITITTNYTTTVT-------TTIT 535
Query: 363 TSKTALITLTRITETGVAVT*TGISVTET 277
T+ T ++T+T T VT T + T T
Sbjct: 536 TNYTTIVTITITTNYTTTVTTTITNYTTT 564
>SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = -2
Query: 561 KEITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISA 382
K+ + GR VP GP + S + T+ R KTTE+++ T+L ++
Sbjct: 475 KDCSQAGR-VPRCIGPTTATLTTETIAASQLTPSSSATTTTIRTNTKTTESAITTSLSTS 533
Query: 381 LVTTIVTSKTALITLT 334
L + TS + L+
Sbjct: 534 LPVILPTSSKSSSALS 549
>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
Length = 232
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -2
Query: 477 GTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALIT------LTRITETG 316
GT+ + S+ + KT +ASL ++L+ ++ + +VT KT T +T T
Sbjct: 13 GTSLFSTPSIQATHSSSIKTRDASLSSSLMPSIRSVVVTEKTTFATSMNTKAFNTMTNT- 71
Query: 315 VAVT*TGISVTETRAAVARIIS 250
+ T + S +ETR +V +S
Sbjct: 72 MTTTSSFTSKSETRESVTHSMS 93
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 417 WSFRVPGLWRLQTRISERQCRLPGLQIWIQPIQVQFRPVPR 539
+ F++ LWR + S R + +W P+ V+FRP PR
Sbjct: 903 YHFQIVPLWRSFSNRSVFGYRFR-VYVWTIPVSVRFRPSPR 942
>SB_29350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 402 ITALISALVTTIVTSKTALITLTRITETGVAVT*TGISVTET 277
IT I+ +TTI T T IT+T V VT T ++VT T
Sbjct: 125 ITITITITITTITTITTITITITITITVTVTVTVT-VTVTVT 165
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 335 VKVIRAVLEVTMVVTKADIRAVIREASVVFQGTRAMEVTDPDIRAAVPVTRATDLDTTNT 514
+ ++ + +T VT IRA RE R + DPD A V T T T
Sbjct: 1420 IATVKTTVTMTATVTTTVIRADNREDDRDRDDNRDRDDCDPDDIATVKTTVTMTATVTTT 1479
Query: 515 GPVSTGT 535
V T T
Sbjct: 1480 AIVITAT 1486
>SB_54230| Best HMM Match : EGF (HMM E-Value=0)
Length = 1359
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 532 TGRNWTCIGCIQI--CSPGNRHCRSDIRVCNLHSPGT 428
T +N T I I + C+PGN C++ NLH T
Sbjct: 1006 TKKNQTVIFIIDVDECTPGNNPCKNRATCSNLHGTYT 1042
>SB_43344| Best HMM Match : Pkinase (HMM E-Value=6.9e-08)
Length = 424
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 245 ITEIILATAARVSVTEIPV*VTATPVSVIRVKVIRAVLEVTMVVTKADIRAVIREASVVF 424
+T I+ A ++ + V +TATP + + +I A ++M++ I V+
Sbjct: 179 LTSTIVIITATTTIATVIVIITATPTISMIIVIITATPTISMIIVIITATTTISMTIVII 238
Query: 425 QGTRAMEV 448
T + +
Sbjct: 239 TATTTISM 246
>SB_9588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 510 LVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVT-SKTALITLT 334
++ R++A T + I+ ++TS + + IT I+ +T I+T T IT+T
Sbjct: 112 IITIRTIAIATASITTITITITSTSTITITMIITITITITITITITMIITIINTTTITIT 171
Query: 333 RITETGVAVT*TGI 292
+ +T T I
Sbjct: 172 STITIIITITITMI 185
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,752,193
Number of Sequences: 59808
Number of extensions: 250391
Number of successful extensions: 972
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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