Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30458
(782 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0) 291 6e-79
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 86 3e-17
SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 86 3e-17
SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08) 37 0.021
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4) 35 0.065
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 1.1
SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26) 31 1.1
SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_26338| Best HMM Match : NapE (HMM E-Value=1.4) 28 7.4
SB_46243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 28 9.8
SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0)
Length = 520
Score = 291 bits (713), Expect = 6e-79
Identities = 136/222 (61%), Positives = 172/222 (77%), Gaps = 4/222 (1%)
Frame = +3
Query: 63 IPTSANPKFFHMVEYFFHRACQVVEDKLVE--DLKSRTP--IEEKKKKVAGILKLMEPCD 230
+ + P F M FF +A VE +L+ D + P E+KK ++ GIL +M+PC
Sbjct: 38 VESDTEPSFTEMCAGFFDQARTYVEHRLLTRPDPPGKIPEKFEDKKHRIKGILDVMKPCQ 97
Query: 231 HILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCA 410
+L + FP++ D+G+Y+++ GYRAQHS HR+P KGGIR+S DV DEV+AL+ LMTFKCA
Sbjct: 98 DVLSVVFPIKLDNGEYKLVQGYRAQHSHHRSPCKGGIRYSEDVDIDEVQALATLMTFKCA 157
Query: 411 CVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREM 590
VDVPFGGAK GIKI+P ++S ELEKITRRFT+ELAKK FIGPG+DVPAPDMGTGEREM
Sbjct: 158 VVDVPFGGAKGGIKIDPSQHSVTELEKITRRFTVELAKKHFIGPGLDVPAPDMGTGEREM 217
Query: 591 SWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRG 716
SW+AD+Y T+GF ++NA+ACVTGKPI+ GGIHGRVSATGRG
Sbjct: 218 SWMADSYDMTLGFGNMNAYACVTGKPIHLGGIHGRVSATGRG 259
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 89.0 bits (211), Expect = 4e-18
Identities = 53/178 (29%), Positives = 89/178 (50%)
Frame = +3
Query: 210 KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSA 389
+++EP + +L + P D G+ ++ GYR + ++ P KGG+RF V +K L
Sbjct: 379 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFLGF 437
Query: 390 LMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDM 569
K + +P GG K G +PK +++E+ + + F LEL + IGP D+PA D+
Sbjct: 438 EQVLKNSLTTLPMGGGKGGSNFDPKGKTDNEVMRFCQSFMLELQR--HIGPDTDIPAGDI 495
Query: 570 GTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFI 743
G G RE+ ++ Y + +TGK GG R ATG G+ + ++ +
Sbjct: 496 GVGGREIGFLFGQYKRIRN----EFTGVLTGKGKGWGGSLLRPEATGYGLLYFIKEVL 549
>SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 448
Score = 86.2 bits (204), Expect = 3e-17
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Frame = +3
Query: 198 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEV 374
A IL +++EP + ++ + P R DS + + G+R + ++ P KGG+RF V +
Sbjct: 47 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 105
Query: 375 KALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDV 554
K L K + +P GG K G +PK S+HE+ + F EL + IGP DV
Sbjct: 106 KFLGFEQVLKNSLTTLPLGGGKGGSDFDPKGKSDHEVMSFCQSFMTELQR--HIGPNTDV 163
Query: 555 PAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFH 725
PA D+G G RE+ ++ Y + +TGK GG R ATG G+ +
Sbjct: 164 PAGDIGVGGREIGFLFGQYKRIRN----EFTGVLTGKSALWGGSLLRPEATGYGLVY 216
>SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 486
Score = 86.2 bits (204), Expect = 3e-17
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Frame = +3
Query: 198 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEV 374
A IL +++EP + ++ + P R DS + + G+R + ++ P KGG+RF V +
Sbjct: 85 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 143
Query: 375 KALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDV 554
K L K + +P GG K G +PK S+HE+ + F EL + IGP DV
Sbjct: 144 KFLGFEQVLKNSLTTLPLGGGKGGSDFDPKGKSDHEVMSFCQSFMTELQR--HIGPNTDV 201
Query: 555 PAPDMGTGEREMSWIADTYAKTVGFQDINAHACVTGKPINQGGIHGRVSATGRGVFH 725
PA D+G G RE+ ++ Y + +TGK GG R ATG G+ +
Sbjct: 202 PAGDIGVGGREIGFLFGQYKRIRN----EFTGVLTGKSALWGGSLLRPEATGYGLVY 254
>SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08)
Length = 131
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 210 KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKAL 383
+++EP + +L + P D G+ ++ GYR + ++ P KGG+RF V +K L
Sbjct: 71 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 127
>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
Length = 582
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 24 TYASHEIPDKLKDIPTSANPKFFHMVEYFFHR--ACQVVEDKLVEDLKSRTPIEEKKKKV 197
TY+ E+ D L++ +S FH+ + HR +++ + V+D K +TP E KK
Sbjct: 334 TYSQSELMD-LRNNSSSLTD--FHI--FCLHRWLPANLLKPEAVKDAKKQTPDLEFKKWT 388
Query: 198 AGILKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRT 323
GIL I E+ PL+R+ + Y+AQ H T
Sbjct: 389 KGILDHAGTVSAISEVIEPLKRNLTELFKAQDYQAQPLDHLT 430
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 736 FSKPWNTPLPVAETLPWMPPWLI----GLPVTQA*ALMS*KPTVFA*VSAIQDISRSPVP 569
F+ P PV E P PP + G+P + P+VFA SA+ + +P P
Sbjct: 524 FAPSSGVPTPVTEPPPAPPPSVFAPSSGVPTPVTAPPPAPPPSVFAPSSAVPTPATAPPP 583
Query: 568 MSGAGTSTPGPMNPFLASSRVKRRVI 491
++ A S P P++ SS + I
Sbjct: 584 VA-ATLSAPPPLDSTSGSSTISSATI 608
>SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26)
Length = 889
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 LITP*LHLWLRPLRIEYLLWLESCVWNVVRDSLISFRN--RQNRASEEIESQ 238
+I P WL L I LLW CV+ ++RDS ++ S EI+S+
Sbjct: 414 VILPEFAYWLCLLTISLLLWQPLCVYTLLRDSHTMLKSPLASQLGSREIDSR 465
>SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 704
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 98 GRIFFPPSLSSCRRQAC*RFEVKDTH*RE-EKESSRYSKTYGTMRSHS*DSISSEARFWR 274
GR F P S++ RQ R+E RE E E K + + +F R
Sbjct: 214 GRDFGPHSINVHERQCAKRWEANKKQQREIEDEKKAREKKREPWKEPVFPPLRRHEQFTR 273
Query: 275 LRNDIRLSRTTFHTQDSNQRRYSI 346
+DIR R + H + + YS+
Sbjct: 274 SLHDIRAKRDSLHLEFEKELLYSL 297
>SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 56 QRYSYKCESEVLPHGRIFFPPSLSSC 133
QR YK SE HGR FP SL C
Sbjct: 163 QRVGYKVSSEAHIHGRQSFPLSLDHC 188
>SB_26338| Best HMM Match : NapE (HMM E-Value=1.4)
Length = 128
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = -1
Query: 665 FASDAGVSVDVLKTDGLRISIGDPRHFSFAGTHVRSGDIHARPNESFFGKFKGETTSDLF 486
+ + G+ + ++ T GL+ S G R +F +G R F + E
Sbjct: 33 YIASYGLCLQIMTTVGLQSSRGKERETAFQEASAATGS--PRDRTYFITNYTYENKDKEL 90
Query: 485 QFMLGVFFGIDLDTGLSTAERHVHARALEG 396
Q + I +DT L +AER V + L+G
Sbjct: 91 QATEKMALNI-VDTVLMSAERFVKIKKLQG 119
>SB_46243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 490 RSLVVSPLNLPKKDSLGLAWMSPLLTWVP 576
RSLVV P +P +LG A + LLT +P
Sbjct: 285 RSLVVEPGTVPSYSNLGYALLGRLLTEMP 313
>SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 598 SPILMRRPSVFKTSTLTPASLANL 669
SP++++ P+VFK + + P SL+ +
Sbjct: 507 SPVILKNPTVFKKTCILPMSLSKI 530
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 535 LGLAWMSPLLTWVPANEKCLGSPILMRRPSVFKTSTLTPASLANLLTRVASTAEFQPR 708
LG + +S L+ +PA+ LGS +L R V T P+S + L R+ PR
Sbjct: 895 LGSSSLSRLILVIPAHRPYLGSSLLPRLILVITAHTCYPSS--SSLPRIILATSAHPR 950
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 450 KINPKEYSEHELEKITRRFTLELAKK 527
K+ PKE+ E ++EK+ R T +++
Sbjct: 464 KVEPKEFDEDDVEKVVERLTRNASQR 489
>SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 601 AIQDISRSPVPMSGAGTSTPGPMNPFLASSR 509
++ D+ + P +SG S GP P LAS++
Sbjct: 190 SLADLLQEPSKLSGQNISQAGPQQPLLASNQ 220
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 550 MSPLLTWVPANEKCLGSPILMRRPSVFKTSTLTPASLANL--LTRVASTAEFQPRAGAYS 723
+SPLL V C+G R + F +T+T SL L L E+ PR + S
Sbjct: 499 LSPLLAVVAGALMCVGPKCTRRLYAAFFLTTITALSLMVLAGLVNAGHWLEYLPRNDSIS 558
Query: 724 T 726
T
Sbjct: 559 T 559
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,475,552
Number of Sequences: 59808
Number of extensions: 559799
Number of successful extensions: 1499
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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