Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30450
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 157 9e-39
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 151 6e-37
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 147 7e-36
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 84 1e-16
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 73 2e-13
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 72 4e-13
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 66 2e-11
At2g45630.2 68415.m05674 oxidoreductase family protein low simil... 64 6e-11
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 64 6e-11
At3g28790.1 68416.m03593 expressed protein 36 0.020
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 35 0.045
At5g28310.1 68418.m03437 oxidoreductase-related low similarity t... 33 0.18
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 30 1.7
At1g79410.1 68414.m09254 transporter-related low similarity to o... 29 2.3
At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box fami... 29 3.0
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 29 3.0
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.0
At5g08380.1 68418.m00987 alpha-galactosidase, putative / melibia... 29 3.9
At4g15300.1 68417.m02342 cytochrome P450 family protein similar ... 29 3.9
At4g13940.1 68417.m02157 adenosylhomocysteinase / S-adenosyl-L-h... 29 3.9
At3g56130.2 68416.m06239 biotin/lipoyl attachment domain-contain... 29 3.9
At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-contain... 29 3.9
At1g78490.1 68414.m09149 cytochrome P450 family protein similar ... 29 3.9
At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family pr... 29 3.9
At3g23810.1 68416.m02993 adenosylhomocysteinase, putative / S-ad... 28 5.2
At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 / ad... 28 6.9
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 28 6.9
At1g13530.1 68414.m01586 expressed protein ; expression support... 28 6.9
At5g61660.1 68418.m07736 glycine-rich protein 27 9.1
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 27 9.1
At3g30290.1 68416.m03825 cytochrome P450 family protein similar ... 27 9.1
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 27 9.1
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 27 9.1
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 9.1
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 157 bits (380), Expect = 9e-39
Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Frame = +3
Query: 186 EIPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGAN 362
++ DAL+VRS T+VT+EV +A +LKVVGRAG G+DN+D+ +A + G V+NAP AN
Sbjct: 119 KVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTAN 178
Query: 363 ALSACELTCRLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVAT 542
++A E L+ +AR+V A ++KAG+W+R+ Y G L GKTLA++G G+VG EVA
Sbjct: 179 TVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVAR 238
Query: 543 RMYAFGMNIIGFDPFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIESTR 698
R GM +I DP+ AD+ + + AD+++LH PL +T+
Sbjct: 239 RAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATK 290
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 151 bits (365), Expect = 6e-37
Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Frame = +3
Query: 201 DALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSAC 377
DAL+VRS T+V +EV ++ +LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A
Sbjct: 103 DALIVRSGTKVGREVFESSHGRLKVVGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAA 162
Query: 378 ELTCRLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAF 557
E LM +AR+V A ++KAG W R Y G L GKTLA+LG G+VG EVA R
Sbjct: 163 EHGIALMAAMARNVAQADASVKAGEWKRNKYVGVSLVGKTLAVLGFGKVGTEVARRAKGL 222
Query: 558 GMNIIGFDPFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIEST 695
GM +I DP+ AD+ + ++ AD+I+LH PL +T
Sbjct: 223 GMRVIAHDPYAPADRAHAIGVDLVSFDEALATADFISLHMPLTPTT 268
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 147 bits (356), Expect = 7e-36
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Frame = +3
Query: 201 DALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSAC 377
DAL+VRS T+V ++V ++ +LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A
Sbjct: 88 DALIVRSGTKVGRDVFESSRGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAA 147
Query: 378 ELTCRLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAF 557
E L+ +AR++ A ++KAG+W R Y G L GKTLA+LG G+VG EVA R
Sbjct: 148 EHGIALLTAMARNIAQADASIKAGKWTRNKYVGVSLVGKTLAVLGFGKVGSEVARRARGL 207
Query: 558 GMNIIGFDPFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIEST 695
GM++I DP+ AD+ + E AD+I+LH PL +T
Sbjct: 208 GMHVITHDPYAPADRARAIGVELVSFEVAISTADFISLHLPLTAAT 253
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Frame = +3
Query: 231 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLA 410
VT E + LK++ AG G D+ID+ +A G+ V G+N +S E +L+L
Sbjct: 109 VTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILM 168
Query: 411 RHVVPASTALKAGRWDRA--LYTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDP 584
R+ VP + G W+ A Y +L GKT+ +G GR+G+ + R+ FG N++ D
Sbjct: 169 RNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDR 228
Query: 585 FVSADQCAQFHCTXM--ELEDIWPLADYITLHTPLIESTR 698
A + + +L ++ P D I ++ PL E TR
Sbjct: 229 LQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTR 268
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Frame = +3
Query: 204 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 383
A+V ++ +++ L++V G+D ID+ +KG+ V N P +L
Sbjct: 48 AVVGNASAGADAQLISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADL 107
Query: 384 TCRLMLVLARHVVPASTALKAGRWDRALY-TGSELAGKTLAILGLGRVGREVATRMYAFG 560
L+L L R + +++G+W + + ++ +GK++ I+GLGR+G +A R AF
Sbjct: 108 AIGLILALLRRLCECDRYVRSGKWKQGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFS 167
Query: 561 MNIIGFDPFVSADQCAQFHCTXMELEDIWPLADYITLHTPLIESTRN 701
I + + D +++ T ++L +D + + PL E TR+
Sbjct: 168 CPINYYSRTIKPDVAYKYYPTVVDLAQ---NSDILVVACPLTEQTRH 211
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = +3
Query: 267 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCRLMLVLARHVVPASTALKA 446
K G +N+DV++A K G+ V N PG + EL L L AR +V A ++
Sbjct: 88 KAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRG 147
Query: 447 G---RWDRALYTGSELAGKTLAILGLGRVGREVATRMY-AFGMNIIGFDPFVS 593
G W L+ G+ L G+T+ ++G GR+G A M F MN+I FD + S
Sbjct: 148 GLYEGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQS 200
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Frame = +3
Query: 186 EIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPG--- 356
E+ + + V Q+ V+ +K++ + G G+D +D+D+A K G+ V P
Sbjct: 90 EVIKNYHICVAMTMQMDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGIKVARIPSEGT 149
Query: 357 ANALSACELTCRLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREV 536
NA S E+ LML L + +L+ TG L GKT+ ILG G +G E+
Sbjct: 150 GNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP--TGDTLLGKTVFILGYGNIGIEL 207
Query: 537 ATRMYAFGMNIIGFDPF 587
A R+ FG +I F
Sbjct: 208 AKRLKPFGSRVIATKRF 224
>At2g45630.2 68415.m05674 oxidoreductase family protein low
similarity to SP|P36234 Glycerate dehydrogenase (EC
1.1.1.29) (NADH-dependent hydroxypyruvate reductase)
{Hyphomicrobium methylovorum}; contains Pfam profile
PF00389: D-isomer specific 2-hydroxyacid dehydrogenase,
catalytic domain
Length = 338
Score = 64.5 bits (150), Expect = 6e-11
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 204 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 383
A++ A VT +++ L++V AGVD++D+ ++G+ V NA + + +
Sbjct: 71 AIIAPVAAPVTADLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSEDVADT 130
Query: 384 TCRLMLVLARHVVPASTALKAGRWD-RALYT-GSELAGKTLAILGLGRVGREVATRMYAF 557
L++ + R + A+ +K W + Y GS+L K + I+GLG +G +VATR+ AF
Sbjct: 131 AVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGSKLGRKRIGIVGLGSIGSKVATRLDAF 190
Query: 558 GMNI 569
G I
Sbjct: 191 GCQI 194
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = +3
Query: 204 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 383
A V+ VT E+L L+++ G+D+ID+ + ++G+ + NA A + +
Sbjct: 55 AFVISGRLPVTDELLSHLPSLQILVCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADC 114
Query: 384 TCRLMLVLARHVVPASTALKAGRWDRA--LYTGSELAGKTLAILGLGRVGREVATRMYAF 557
L++ + R + A +++G W + GS+++GK + I+GLG +G VA R+ +F
Sbjct: 115 AVGLLISVLRRIPAADRYVRSGNWAKFGDFQLGSKVSGKRVGIVGLGSIGSFVAKRLESF 174
Query: 558 G 560
G
Sbjct: 175 G 175
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 367 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 248
S +P TPTP P ST STP P+ PT + TP++
Sbjct: 271 SGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPST 310
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = -1
Query: 439 SAVEAGTTWRARTNIKRQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 260
S +G T++ T S P TPTP P ST STP P+ PT
Sbjct: 255 SGGSSGNTYKDTTGSSSGASPSGSPTPTPS---TPTPSTPTPSTPTPSTPTPSTPT--PS 309
Query: 259 TPASNTSLVT*VAERTTRAS 200
TPA +T +E+ + ++
Sbjct: 310 TPAPSTPAAGKTSEKGSESA 329
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = -1
Query: 517 PRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSALAPGALIT 338
P +A P SS ++ A P+FS + + + +I S + A T
Sbjct: 232 PSFSVASSAPGSSSSIFGATGSSPSFSVASSASG--SSPSIFGATGSSPFFGSSSSAGST 289
Query: 337 PTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 239
P+ F + S + S+P+P +TF+ + SNTS
Sbjct: 290 PSLFASSSSGATTSSPSPFGVSTFNSSSTSNTS 322
>At5g28310.1 68418.m03437 oxidoreductase-related low similarity to
glyoxylate reductase from Thermococcus litoralis
[gi:13515409]
Length = 233
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 492 KTLAILGLGRVGREVATRMYAFGMNI 569
K + I+GLG +G +VATR+ AFG I
Sbjct: 115 KRIGIVGLGSIGSKVATRLKAFGCQI 140
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 521 PAKAKDGEGLASELAASVQSPVPPASLQRSGSWD 420
P G AS AA+ + P PP S RS WD
Sbjct: 246 PGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g79410.1 68414.m09254 transporter-related low similarity to
organic anion transporter 3 [Rattus norvegicus]
GI:5545293; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 515
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 468 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSAD 599
Y GS + G LA++ G +GR+ +F M++ G F+S++
Sbjct: 126 YVGSIVGGVVLAMIPDGSLGRKQLLFFSSFAMSLTGISIFLSSN 169
>At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box family
protein (FBX1) E3 ubiquitin ligase SCF complex F-box
subunit; almost identical to unusual floral organs
(UFO)GI:4376159 from [Arabidopsis thaliana]
Landsberg-erecta; one amino acid difference
Length = 442
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 316 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWL 194
+ST ++ P+ P +++FT +SN+S T ++ W+
Sbjct: 2 DSTVFINNPSLTLPFSYTFTSSSNSSTTTSTTTDSSSGQWM 42
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 538 ATSRPTLPRPRMARVL-PASSLPVYRARSHLPAFSAVEAGTTWRARTNIKRQVSSHALSA 362
A + P +P + P+ S + + R L GT W R+N+ S+ ++
Sbjct: 142 AYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAI 201
Query: 361 LAPGALI 341
PGA I
Sbjct: 202 ELPGASI 208
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 358 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 239
A G L+ L + + L PAP +PT + P NTS
Sbjct: 207 AKGILVNSFVDLESNAIKALQEPAPDKPTVYPIGPLVNTS 246
>At5g08380.1 68418.m00987 alpha-galactosidase, putative / melibiase,
putative / alpha-D-galactoside galactohydrolase,
putative similar to alpha-galactosidase SP:Q42656 from
[Coffea arabica]; contains Pfam profile PF02065:
Melibiase
Length = 410
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -1
Query: 532 SRPTLPRPRMARVLPASSLPVYRARSHL----PAFSAVEAGTTWRARTNIK 392
S+PT+ P M R L S P++ + PA G +WR +IK
Sbjct: 182 SKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDIK 232
>At4g15300.1 68417.m02342 cytochrome P450 family protein similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 487
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 443 GWQ-VGPGSVHWQRARWQDPR--HPWPWQGRPRG 535
GW +G +H+ +++DP +PW W+G+ G
Sbjct: 383 GWTFMGYPHIHFNSEKYEDPYAFNPWRWEGKDLG 416
>At4g13940.1 68417.m02157 adenosylhomocysteinase /
S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH)
identical to SP|O23255 Adenosylhomocysteinase (EC
3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
(AdoHcyase) {Arabidopsis thaliana}; strong similarity to
SP|P50248 Adenosylhomocysteinase (EC 3.3.1.1) {Nicotiana
sylvestris}
Length = 485
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 483 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTXMELEDIWPLA 656
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 657 DYITLHT 677
D T
Sbjct: 319 DIFVTTT 325
>At3g56130.2 68416.m06239 biotin/lipoyl attachment domain-containing
protein low similarity to SP|Q06881 Biotin carboxyl
carrier protein of acetyl-CoA carboxylase (BCCP)
{Anabaena sp.}; contains Pfam profile PF00364:
Biotin-requiring enzyme
Length = 205
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = -1
Query: 400 NIKRQVSSHALSALAPGALITPT--PFLPAE----STSMLSTPAPARPTTFSFTPASNTS 239
N+KR++ A + P A I+PT P +P+E S S +P+ A+P++ +P NTS
Sbjct: 42 NLKRKIG--AATNPIPVADISPTVAPPIPSEPMNKSASSAPSPSQAKPSSEKVSPFKNTS 99
>At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-containing
protein low similarity to SP|Q06881 Biotin carboxyl
carrier protein of acetyl-CoA carboxylase (BCCP)
{Anabaena sp.}; contains Pfam profile PF00364:
Biotin-requiring enzyme
Length = 281
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = -1
Query: 400 NIKRQVSSHALSALAPGALITPT--PFLPAE----STSMLSTPAPARPTTFSFTPASNTS 239
N+KR++ A + P A I+PT P +P+E S S +P+ A+P++ +P NTS
Sbjct: 118 NLKRKIG--AATNPIPVADISPTVAPPIPSEPMNKSASSAPSPSQAKPSSEKVSPFKNTS 175
>At1g78490.1 68414.m09149 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]
Length = 479
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +2
Query: 443 GW--QVGPGSVHWQRARWQDP--RHPWPWQGR 526
GW V P +VH+ A +++P +PW W+G+
Sbjct: 376 GWIVAVAPSAVHFDPAIYENPFEFNPWRWEGK 407
>At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 834
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 183 MEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGAN 362
ME ++ V S KEVLDA V ++V A N+ ++ G+I+ P +
Sbjct: 544 MESKFYEGPVNGSKADSRKEVLDAAVFSRLVQIAKTASPNLLRNAISVIEFGIISNPNMD 603
Query: 363 ALSACELTCRLMLVLARHVV 422
+ + ++T L L L + V+
Sbjct: 604 TIISKDITTVLDLALRQKVL 623
>At3g23810.1 68416.m02993 adenosylhomocysteinase, putative /
S-adenosyl-L-homocysteine hydrolase, putative /
AdoHcyase, putative strong similarity to
SP|P50248|SAHH_TOBAC Adenosylhomocysteinase (EC 3.3.1.1)
(S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
{Nicotiana sylvestris}; contains Pfam profile PF00670:
S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Length = 485
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 483 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTXMELEDIWPLA 656
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 657 D 659
D
Sbjct: 319 D 319
>At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 /
adenylate dimethylallyltransferase / cytokinin synthase
(IPT8) identical to adenylate isopentenyltransferase
(IPT8) [Arabidopsis thaliana] GI:14279068
Length = 330
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 RSATQVTKEVLDAGVKLKVV---GRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELT 386
RS +T ++ K KVV G G+G + +D A + ++N+ ++T
Sbjct: 27 RSVVPMTTVCMEQSYKQKVVVIMGATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVT 86
Query: 387 CRLMLVLARHVVP 425
M +L R VP
Sbjct: 87 TNQMSILERCGVP 99
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 489 GKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVS 593
GK+L ++GLG +G AFG+++ F +S
Sbjct: 182 GKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSIS 216
>At1g13530.1 68414.m01586 expressed protein ; expression supported
by MPSS
Length = 385
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 428 FHCAEGWQVGPGSVHWQRARWQDPRHPWPWQG 523
F +E ++G GSV +R +W++ R W +G
Sbjct: 296 FGVSETQKIGIGSVVLERMKWEEERFGWSKKG 327
>At5g61660.1 68418.m07736 glycine-rich protein
Length = 134
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 377 RADLPFDVGSGSPRGPSFHCAEGWQVGPGS 466
R ++P + GSG RGP++ GW PGS
Sbjct: 27 RGNMPGESGSG--RGPNWEYNWGWGSAPGS 54
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 599 ISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLASELA 477
I+R R DVH PS L DP + D E ELA
Sbjct: 1067 ITRESRQSETDVHISDNGPSTSLPEDPNLSSDNELEDDELA 1107
>At3g30290.1 68416.m03825 cytochrome P450 family protein similar to
Cytochrome P450 85 (SP:Q43147) {Lycopersicon
esculentum}; similar to GB:C71417 from [Arabidopsis
thaliana] (Nature 391 (6666), 485-488 (1998))
Length = 408
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 443 GWQ-VGPGSVHWQRARWQDPR--HPWPWQG 523
GW +G S H+ +++DP +PW W+G
Sbjct: 301 GWNFMGYPSAHFDPTKYEDPLEFNPWRWKG 330
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 583 GSNPMMFMPKAYILVATSRPTLPRPRMARVLPASSL-PVYRARSHLPAFSAVEAGTTWRA 407
G NP++F + A P +PRPRM V +SSL + L A S E G+
Sbjct: 1017 GQNPLLFPGRNLRSPAVMEPPVPRPRM--VSGSSSLREQVEQQQPLSAKSQEETGSVSAD 1074
Query: 406 RTNIKRQV 383
I+R++
Sbjct: 1075 SALIQRKL 1082
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 474 QCTEPGPTCQPSAQWKLGPRGEPEPTSN 391
Q + P P QPS+ K P +P+P SN
Sbjct: 448 QNSNPFPVSQPSSNSKPFPVSQPQPASN 475
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -1
Query: 382 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 248
SS LS+L+P ++P+P + S++ S+ +P+ P S +P+S
Sbjct: 74 SSSPLSSLSPS--LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,956,706
Number of Sequences: 28952
Number of extensions: 312200
Number of successful extensions: 1220
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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