Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30428
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 33 0.25
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 0.57
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 0.75
At1g63700.1 68414.m07209 protein kinase, putative contains prote... 31 0.75
At5g41140.1 68418.m05001 expressed protein 30 1.3
At4g25515.1 68417.m03679 transcriptional co-regulator family pro... 30 1.3
At1g80010.1 68414.m09362 far-red impaired responsive protein, pu... 30 1.3
At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical t... 30 1.7
At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc ... 29 2.3
At3g22770.1 68416.m02871 F-box family protein-related contains T... 29 2.3
At4g25520.1 68417.m03680 transcriptional co-regulator family pro... 29 3.0
At2g32910.1 68415.m04035 expressed protein 29 3.0
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 29 3.0
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 29 4.0
At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear... 29 4.0
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 29 4.0
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 29 4.0
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 29 4.0
At5g01920.1 68418.m00111 protein kinase family protein contains ... 28 5.3
At3g27550.1 68416.m03443 group II intron splicing factor CRS1-re... 28 5.3
At2g12400.1 68415.m01339 expressed protein 28 5.3
At5g08020.1 68418.m00933 replication protein, putative similar t... 28 7.0
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 28 7.0
At3g19470.1 68416.m02468 F-box family protein contains F-box dom... 28 7.0
At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) simi... 28 7.0
At5g61560.1 68418.m07725 protein kinase family protein contains ... 27 9.2
At4g28365.1 68417.m04060 plastocyanin-like domain-containing pro... 27 9.2
At3g51050.1 68416.m05590 FG-GAP repeat-containing protein 27 9.2
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 27 9.2
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +3
Query: 6 PHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQD 185
P H + R H PR+ + P+ + P + + +++V C NS S
Sbjct: 833 PRSHEASSSRGYNHPPSPRVSKELNKTPSISGSPSATRNKSPRSSENVNSCGNSSSGGNS 892
Query: 186 VTRTNSDDAL 215
V + N+D ++
Sbjct: 893 VVKRNTDTSI 902
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 81 PAPATNPD---PEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALS 218
PAP T PD P PS+ L +D P +S+S + T N + S
Sbjct: 126 PAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGAS 174
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 81 PAPATNPD---PEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSN 221
PAP T PD P PS+ L +D P +S+S + T N D +SN
Sbjct: 126 PAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVN--DQVSN 173
>At1g63700.1 68414.m07209 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to MEK kinase
(MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848
Length = 883
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVP 155
H H P + G R P+P ++P + T LT +P
Sbjct: 737 HSHSPHISGRRSPSPISSPHALSGSSTPLTGCGGAIP 773
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +3
Query: 198 NSDDALSNSNLTVAEDCANDEQENELDRVKS 290
++DD++++SN T+ D +NE+D++K+
Sbjct: 267 STDDSMNSSNDTIPRDTTRTSSDNEVDKLKA 297
>At4g25515.1 68417.m03679 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 471
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +3
Query: 3 APHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQ 182
+PH HG T ++ HQ + + P S T+ + N +
Sbjct: 368 SPHSHGNTQEQQMLHQLLQEMTENGASVEQQQAFPGQSGSNNNTERNTTASTSNISGGGR 427
Query: 183 DVTRTNSDDALSNSNLTVAED 245
+R NS A SN+NL +ED
Sbjct: 428 VPSRINSFKASSNNNLPFSED 448
>At1g80010.1 68414.m09362 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 696
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 9 HVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEP 113
H H P R + H + PA TNP+P P
Sbjct: 159 HNHSFDPQRAHNSKSHKKSSSSASPATKTNPEPPP 193
>At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical to
PEX14 [Arabidopsis thaliana] GI:11094252; contains Pfam
profile PF04695: Peroxisomal membrane anchor protein
(Pex14p) conserved region; supporting cDNA
gi|11094253|dbj|AB037539.1|
Length = 507
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 PHVHGCTPVRRRGHQHHPRLRGDR-QPAPATNPDPEPSARTTLTQTDDVVPCVNSV 170
P V G + RR L + A PDP PS++TT+T + D V++V
Sbjct: 68 PRVRGSPVIHRRSFLERKGLTKEEIDEAFRRVPDPPPSSQTTVTTSQDGQQAVSTV 123
>At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc
finger domain-containing protein-related contains Pfam
profiles PF03468: XS domain, weak hit to PF03470: XS
zinc finger domain
Length = 625
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 120 AQTARGRDSWRGRVDGRPLNAGGVGAPCAARGCNRGRGVR 1
+Q + +W G+ GR N G G + RG GRG++
Sbjct: 65 SQNSNPPRAWGGQQQGRGSNVSGRGNNVSGRGNGNGRGIQ 104
>At3g22770.1 68416.m02871 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 327
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 434 TSKFCKFYSFRVIIGYIRRKRGNDSFRTVSC-RPFFKREFIV 312
T +F KF S+ +GY + + + R ++C RP F EFI+
Sbjct: 87 THQFNKFDSYSYALGYDKSSKSHKILRCITCLRPHF-HEFII 127
>At4g25520.1 68417.m03680 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 748
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/81 (24%), Positives = 32/81 (39%)
Frame = +3
Query: 3 APHVHGCTPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQ 182
+PH HG TP ++ HQ + + S + + + N +
Sbjct: 645 SPHSHGNTPEQQMLHQLLQEMSENGGSVQQQQAFSGQSGSNSNAERNTTASTSNISGGGR 704
Query: 183 DVTRTNSDDALSNSNLTVAED 245
+R NS A SN+NL +ED
Sbjct: 705 APSRNNSFKAASNNNLHFSED 725
>At2g32910.1 68415.m04035 expressed protein
Length = 691
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 2 RTPRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPR 109
R+ R R P +++G PT + R S PR E +PR
Sbjct: 467 RSDRDRYAPGSSRGHPTRKHERRRASPPPRREEQPR 502
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTD-DVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDC 248
D+Q + E S+ L +TD DVVP + SES+ TR N+ + S+ + C
Sbjct: 1738 DKQHSRRKEQRAETSSDRKLRKTDGDVVPISSKGSESKH-TRRNAKEEASSQREKLVASC 1796
Query: 249 ANDEQENELDR 281
E L R
Sbjct: 1797 EKVTSEETLRR 1807
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 11 RPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAVC 118
+PRL + G P PP+ + P P S PR+ C
Sbjct: 53 KPRLQRYSPYGNPPPPSPQYSPPPPPSQSSPPRSRC 88
>At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear
antigen EBNA-1 (GI:3342234) {Cercopithecine herpesvirus
15}
Length = 118
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 114 TARGRDSWRGRVDGRPLNAGGVG---APCAARGCNRGRG 7
+ RG GR DGR + GG G P A G RGRG
Sbjct: 54 SGRGGGRGDGRGDGRGIGGGGRGRGRIPAAFMGRGRGRG 92
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 426 VLQVLQFQGHHR-IYQKEARQR*LPHRLLQTFLQ-TRIHRLSYLENQYS*PYLIRFLVHH 253
V +V + + H R +Q++ + H+ + T H + N +S P ++ L HH
Sbjct: 160 VCRVFKKKNHFRGFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS-PLILHPLDHH 218
Query: 252 SHSPRLQ*DSNLKVHRHYSSLSHLEIH 172
H + ++ +H ++LSH +H
Sbjct: 219 HHHHHIGRQIHMPLHEFANTLSHGSMH 245
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 426 VLQVLQFQGHHR-IYQKEARQR*LPHRLLQTFLQ-TRIHRLSYLENQYS*PYLIRFLVHH 253
V +V + + H R +Q++ + H+ + T H + N +S P ++ L HH
Sbjct: 160 VCRVFKKKNHFRGFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS-PLILHPLDHH 218
Query: 252 SHSPRLQ*DSNLKVHRHYSSLSHLEIH 172
H + ++ +H ++LSH +H
Sbjct: 219 HHHHHIGRQIHMPLHEFANTLSHGSMH 245
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 426 VLQVLQFQGHHR-IYQKEARQR*LPHRLLQTFLQ-TRIHRLSYLENQYS*PYLIRFLVHH 253
V +V + + H R +Q++ + H+ + T H + N +S P ++ L HH
Sbjct: 160 VCRVFKKKNHFRGFHQEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS-PLILHPLDHH 218
Query: 252 SHSPRLQ*DSNLKVHRHYSSLSHLEIH 172
H + ++ +H ++LSH +H
Sbjct: 219 HHHHHIGRQIHMPLHEFANTLSHGSMH 245
>At5g01920.1 68418.m00111 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 495
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 494 SASSSPPVFSFGQDLGTFTSTSKFCKFYSFRVIIGYIRRKRG 369
S S PP F L TF+ T K+ F S ++ Y+ + G
Sbjct: 61 SLSHLPPFLDFQNSLATFSDTQKWGFFVSAGIVWFYLTARPG 102
>At3g27550.1 68416.m03443 group II intron splicing factor
CRS1-related contains weak similarity to CRS1 [Zea mays]
gi|9837550|gb|AAG00595
Length = 491
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 39 RGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCV-NSVSESQDVTRTNSDDAL 215
R + R R+ +PDP P R + DDV+ + N++ +S+D +DA
Sbjct: 382 RARSSNTNTRRPREDFKRRSPDPRPRPRAQVRSDDDVLSDLDNTMWDSED-----EEDAP 436
Query: 216 SNSNLTVAEDCANDEQEN 269
+ ++ ++D DE EN
Sbjct: 437 PANYISSSDD---DEDEN 451
>At2g12400.1 68415.m01339 expressed protein
Length = 541
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 111 PSARTTLTQTDDVVPCVNSVSESQDVTRT 197
P+A T L DD++PCV++ + + +TRT
Sbjct: 325 PTAHTAL---DDILPCVDNATARETLTRT 350
>At5g08020.1 68418.m00933 replication protein, putative similar to
replication protein A1 [Oryza sativa] GI:2258469;
contains InterPro entry IPR004365: OB-fold nucleic acid
binding domain
Length = 604
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 81 PAPATNPDPEPSARTTLTQTD--DVVPCVNSVSESQDVTRTNSDDALSNSNLTVAED 245
P N P T + Q D DV+ V SVS + + R N ++ + ++T+A++
Sbjct: 271 PETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADE 327
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 72 DRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDCA 251
++ P+P+ +P P PS + P V + +V R ++ D+ SNS++ +D A
Sbjct: 530 EQSPSPSPSPSPSPSPSPS--------PSVLASECCSEVERIDTLDSESNSSI---DDSA 578
Query: 252 NDEQEN 269
D QE+
Sbjct: 579 TDHQED 584
>At3g19470.1 68416.m02468 F-box family protein contains F-box domain
Pfam:PF00646
Length = 382
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 443 FTSTSKFCKFYSFRVIIGYIRRKRGNDSFRTVSCRPFFK 327
F T +F KF S+ +GY + ++ + R ++C FK
Sbjct: 144 FEPTHQFNKFDSYSYALGYDKSRKSHKILRGITCLDPFK 182
>At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 415
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 658 PPPSSWIRRFRAATSDSALFSAVFFMFCNSFLIMENFIIVSEENIELP 515
P PS W R +R+A F+ ++ CNSF+ + + I N LP
Sbjct: 181 PSPSEWSRFYRSANIVFCPFALLY--TCNSFVQLNHPISFLFPNTHLP 226
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 159 VNSVSESQDVTRTNSDDALSNSNLTVAEDCANDEQENELDR 281
+++ + QD+ + S++A NLT+ E+ A++ E E +R
Sbjct: 321 IDASKKMQDLNQRRSEEATRLKNLTIREEEADEVVEMERER 361
>At4g28365.1 68417.m04060 plastocyanin-like domain-containing
protein
Length = 199
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 261 VHHSHSPRLQ*DSNLKVHRHYSS 193
VHHSHSPR S VH+ SS
Sbjct: 130 VHHSHSPRHTSPSPSPVHQELSS 152
>At3g51050.1 68416.m05590 FG-GAP repeat-containing protein
Length = 698
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 693 GGRETLLGPLEVLLPAVGYVGSGQPLRTQPFSAQYSLC 580
G R + G +EVL P SG P+R Q F+ S+C
Sbjct: 447 GERTVVSGSMEVLKPCWAVATSGVPIREQLFNV--SIC 482
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRT-NSDDALSN 221
H+H L D +T+P +P TLT ++ ++++ ++ T+ + +D+LS
Sbjct: 739 HEHSANLELD-----STSPSLKPVEEDTLTSESGLLEMKSNINNQEETTKALHGEDSLSK 793
Query: 222 SNLTVAEDCANDEQENELDRV 284
++ E+ A + LD V
Sbjct: 794 HPVSAHEE-ATTRYNSILDMV 813
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,364,873
Number of Sequences: 28952
Number of extensions: 289988
Number of successful extensions: 1249
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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