Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30419
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 95 3e-20
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 90 1e-18
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 85 6e-17
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 82 4e-16
At1g64030.1 68414.m07252 serpin family protein / serine protease... 82 4e-16
At1g62170.1 68414.m07013 serpin family protein / serine protease... 79 4e-15
At2g14540.1 68415.m01628 serpin family protein / serine protease... 78 7e-15
At2g35580.1 68415.m04357 serpin family protein / serine protease... 69 4e-12
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 63 2e-10
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 63 2e-10
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.4
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.4
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.4
At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase... 29 3.2
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 4.3
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 4.3
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 4.3
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 5.6
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 5.6
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 5.6
At1g31240.1 68414.m03823 expressed protein identical to hypothet... 28 5.6
At2g34610.1 68415.m04252 expressed protein 28 7.4
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 7.4
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 9.8
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 95.5 bits (227), Expect = 3e-20
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 9/229 (3%)
Frame = +1
Query: 79 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 252
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 253 IGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQN 432
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQ 121
Query: 433 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAGVLVNAIYFKGAWSS 594
+DF+ V +N W + +TN IK +++ D + + +L NA+YFK AWS
Sbjct: 122 VDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSR 181
Query: 595 KFDERLTSDRDFYVSKDKTIKVP-MMYKRGDYXYGESAALNAQLIXIPY 738
KFD +LT D DF++ T+KVP MM + Y G Q++ +PY
Sbjct: 182 KFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYD---GFQVLRLPY 227
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 90.2 bits (214), Expect = 1e-18
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Frame = +1
Query: 154 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 333
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 334 -----LKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 495
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 496 NNRIKDLVNPDSLSSATAGVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
N IK++++ DS+ + +L+ NA+YFKGAWS KFD +LT DF++ +KVP M
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFM 206
Query: 670 --YKR 678
YK+
Sbjct: 207 TNYKK 211
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 84.6 bits (200), Expect = 6e-17
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Frame = +1
Query: 109 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 288
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 289 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKN 450
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 451 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDF 630
+N W E+ TN I +++ S S T + NA+YFKG W+ KFDE LT + +F
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEF 191
Query: 631 YVSKDKTIKVPMM-YKRGDYXYGESAALNAQLIXIPY 738
++ + P M K+ Y SA +++ +PY
Sbjct: 192 HLLDGNKVTAPFMTSKKKQYV---SAYDGFKVLGLPY 225
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 328 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 504
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 505 IKDLVNPDSLSSATAGVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
IK +++ DS+ + + LV NA+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFM 141
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 81.8 bits (193), Expect = 4e-16
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Frame = +1
Query: 160 SVVLSAFSVLPPLAQLALASDGE-THEELLKAIGFPDDDAIRTEFASKSR----DLRSIK 324
+V+ S S+ + A G+ ++L + D ++T F + D +
Sbjct: 30 NVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATG 89
Query: 325 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 501
G ++ AN +++ D F + + F + +DF S+ K +N WVE +TNN
Sbjct: 90 GPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNN 149
Query: 502 RIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
IKDL+ S++S T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 150 LIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 78.6 bits (185), Expect = 4e-15
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Frame = +1
Query: 43 TIAIAAMAAVTNLS--NVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQL 207
T + A +++N+ +K ND T + + V KN+ + V S S+ L +
Sbjct: 50 TDLVIASPSLSNIDVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMV 106
Query: 208 ALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLD 381
A +S GE EEL I + E + R++ S+ V+ K K+ V +G +D
Sbjct: 107 AASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMD 166
Query: 382 ENFAV--VSRDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 540
++ +V +S+D+F ++ +DF SK +N W +TN IKDL+ S++S
Sbjct: 167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTS 226
Query: 541 ATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 227 LTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 77.8 bits (183), Expect = 7e-15
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Frame = +1
Query: 76 NLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 243
++ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 244 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDV 411
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 412 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 588
F + +DF + +N W +TN+ IK+++ S++S T + NA+YFKGAW
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 589 SSKFDERLTSDRDFYVSKDKTIKVPMM 669
FD+ +T D+ F++ K++ VP M
Sbjct: 207 EKAFDKSMTRDKPFHLLNGKSVSVPFM 233
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 68.5 bits (160), Expect = 4e-12
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Frame = +1
Query: 196 LAQLALASDGETHE-----ELLKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVY 357
L+ +A +S G+T LL+A A+ +E + D + G + AN ++
Sbjct: 40 LSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISAANGLW 99
Query: 358 VHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV--NPD 528
+ ++ +F + + + + +DF +K + +N WVE+ TN I +L+ NP
Sbjct: 100 IEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPK 159
Query: 529 SLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
S + T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 160 S-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 463 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 642
+ +N W ++TN I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGK 73
Query: 643 DKTIKVPMM 669
+ + VP M
Sbjct: 74 E--VHVPFM 80
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +1
Query: 469 INDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 648
+N W +TN IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F++ K
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGK 98
Query: 649 TIKVPMM 669
+ VP M
Sbjct: 99 QVLVPFM 105
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 174 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 67
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 198 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 85
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 246
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase GB:BAA88472
GI:6624205 from (Cucumis sativus); contains Pfam profile
PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 459
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 421 DVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWS 591
+++N D + + DW + + K+LVN D+ +A GV + F AWS
Sbjct: 34 ELENFDVLVDDDDDTKLLDWPSFTSRHSGKNLVNVDTFGAAGDGVSDDTQAFVSAWS 90
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 73 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 252
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 253 IGFPDD 270
GF D+
Sbjct: 244 NGFFDN 249
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +1
Query: 361 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVN----PD 528
HD DE + ++++N+ FS+N+ A ++ DW E T + D + +
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITEYGLLDQSSFQEKVE 320
Query: 529 SLSSATAGVLVNAIYFKGAWSSKFDERLT-SDRDFYVSKDKTIK 657
LSS + G S +RL SDR F ++IK
Sbjct: 321 RLSSTNGDAATGTVTRGGISSGVGIQRLDGSDRKFQELTIESIK 364
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 171 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 79
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 142 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 294
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 335 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 156
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 155 PG 150
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 335 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 156
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 155 PG 150
G
Sbjct: 195 KG 196
>At1g31240.1 68414.m03823 expressed protein identical to
hypothetical protein GB:AAD21690 GI:4512621 from
(Arabidopsis thaliana)
Length = 277
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +1
Query: 472 NDWVEENTNNRIKDLVNPDSLSSATAG---VLVNAIYFK---GAWSSKFDERLTSDRD 627
+D + EN+++ I+ + P+SL S + G V+ + + FK WSS D RL RD
Sbjct: 191 SDHLWENSDSVIRREILPESLKSKSGGRLPVMRDKVRFKMEQRDWSSGGDTRLERSRD 248
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Frame = +1
Query: 91 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 261
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 262 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 420
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 421 DVQNIDFSK--NTVAAKSINDWVE 486
++ +FSK N + + D+++
Sbjct: 257 KEESEEFSKMSNEELNRRVEDFIQ 280
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 296 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 117
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 116 V 114
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 85 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 264
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 265 DDDAIRTE 288
+ I E
Sbjct: 563 GNSCISHE 570
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,649
Number of Sequences: 28952
Number of extensions: 300230
Number of successful extensions: 967
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -