Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30862
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15128-1|AAA86956.1|  447|Homo sapiens beta-1,2-N-acetylglucosam...    89   2e-17
BC006390-1|AAH06390.1|  447|Homo sapiens mannosyl (alpha-1,6-)-g...    89   2e-17

>U15128-1|AAA86956.1|  447|Homo sapiens
           beta-1,2-N-acetylglucosaminyltransferase II protein.
          Length = 447

 Score = 88.6 bits (210), Expect = 2e-17
 Identities = 38/94 (40%), Positives = 59/94 (62%)
 Frame = +3

Query: 252 KVDITPWHSSMHNMGFGFNRSVWHNIMEIQEQFCAYDDYNWDYSLLHLSQNRKNQEKFKV 431
           KVD+  W S+ HNMG    R+ +  ++E  + FC YDDYNWD++L +L+ +    + +KV
Sbjct: 306 KVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCL-PKFWKV 364

Query: 432 IMSKGPRVFHIGECGIHHKXSNCNASPS*ARSRS 533
           ++ + PR+FH G+CG+HHK   C  S   A+  S
Sbjct: 365 LVPQIPRIFHAGDCGMHHK-KTCRPSTQSAQIES 397



 Score = 37.5 bits (83), Expect = 0.037
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   VAEDFIYMLNLLRATADRSCPQCEIISLGTYLKTYQYHANGDK 129
           +A DF ++   +     + CP+C+++SLGTY  +  ++   DK
Sbjct: 264 LAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSFYGMADK 306


>BC006390-1|AAH06390.1|  447|Homo sapiens mannosyl
           (alpha-1,6-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase protein.
          Length = 447

 Score = 88.6 bits (210), Expect = 2e-17
 Identities = 38/94 (40%), Positives = 59/94 (62%)
 Frame = +3

Query: 252 KVDITPWHSSMHNMGFGFNRSVWHNIMEIQEQFCAYDDYNWDYSLLHLSQNRKNQEKFKV 431
           KVD+  W S+ HNMG    R+ +  ++E  + FC YDDYNWD++L +L+ +    + +KV
Sbjct: 306 KVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCL-PKFWKV 364

Query: 432 IMSKGPRVFHIGECGIHHKXSNCNASPS*ARSRS 533
           ++ + PR+FH G+CG+HHK   C  S   A+  S
Sbjct: 365 LVPQIPRIFHAGDCGMHHK-KTCRPSTQSAQIES 397



 Score = 37.5 bits (83), Expect = 0.037
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   VAEDFIYMLNLLRATADRSCPQCEIISLGTYLKTYQYHANGDK 129
           +A DF ++   +     + CP+C+++SLGTY  +  ++   DK
Sbjct: 264 LAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSFYGMADK 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,499,260
Number of Sequences: 237096
Number of extensions: 1785128
Number of successful extensions: 4406
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4404
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)