Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30855
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.5  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 228 GNFDGRKNRAFLVIFLNFNIIYKIFLKHQLYHQSCQTLLMSTRYFKLVT-VKNISSII 58
           GNF+   +R    IFLN N I ++  +      +    L  T+ F+ +T  K I+ I+
Sbjct: 77  GNFNEHVSREIAKIFLNENEINQLITECSAISDT-NVHLKITKIFQCITKFKTINDIL 133


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 172 YNLQNIFKTSIVSSKLSNPSYVY 104
           Y ++ I+  SIV   L NPS++Y
Sbjct: 454 YFIEPIYFHSIVLGSLLNPSHMY 476


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 520 CNSWC*GADVQCELVWLDTTVLCVCTVK 603
           C S   G   +CEL    T  +CVC  K
Sbjct: 82  CASKYCGIGKECELSPNSTIAVCVCMRK 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,069
Number of Sequences: 438
Number of extensions: 3883
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)