Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30840
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    30   0.020
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    28   0.081
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.76 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.76 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.76 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   1.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +2

Query: 260 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPRIPLAI 400
           +++C   NG C   C+  P          C C   L L SDG  CV ++   I
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTI 85


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
 Frame = +2

Query: 260 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPR 385
           +++C   NG C   C+  P          C C   L L SDG  CV +
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEK 80


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 466 VNQESETAERSTARTHAALKKLLEHPMLKDDGGEGNYAYR 585
           V+ E+   ERST R+HA    + + P     GG G  + R
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSR 293


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 466 VNQESETAERSTARTHAALKKLLEHPMLKDDGGEGNYAYR 585
           V+ E+   ERST R+HA    + + P     GG G  + R
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSR 293


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 466 VNQESETAERSTARTHAALKKLLEHPMLKDDGGEGNYAYR 585
           V+ E+   ERST R+HA    + + P     GG G  + R
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSR 293


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 290 CEQRCVNDPGSFHCECSPPLSLASDGKKCVPRIPLAIAEPLPLVRASSRCYAPCDTVTWL 469
           CE  C++D  +        LSL S+       +    AEP P+ +A S+C+    T   +
Sbjct: 666 CETFCLDDDDTL---LEVALSLGSEALSAAT-VRFIEAEPQPIGKALSKCHNRNVTTCNM 721

Query: 470 TRKVRQLND 496
            RK     D
Sbjct: 722 FRKTNLSGD 730


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 178 SPCTSHACSHRFRLHGSIDFGIHRPATCWCVSQQ 77
           +P T H   H  R   S+D   HR    W V ++
Sbjct: 77  NPETHHPIRHGRRQSRSMDLNAHREQMSWPVKKE 110


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 207  TQGSRNTTYSLP 172
            TQ SRN TYS P
Sbjct: 1297 TQPSRNNTYSTP 1308


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 212 PEPRVAGTPHTLSLHFACLLTQVQTARLH 126
           P      TP TL+L    LL +++   LH
Sbjct: 26  PASPTLSTPPTLNLMEQILLAKIEKQNLH 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,182
Number of Sequences: 438
Number of extensions: 5066
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)