Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30824
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              44   1e-06
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.30 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 344 PCLKVHCSAGRVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRSDAY 520
           PC   +C  G+ CE++ +   A+C C++ CP      R VC +  + + + CE++R+  +
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAACH 137

Query: 521 ASTTL 535
           + ++L
Sbjct: 138 SGSSL 142


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 25/88 (28%), Positives = 32/88 (36%)
 Frame = +2

Query: 374 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRSDAYASTTLISAVVR 553
           +VC    H D+ C C+       DS   V  NFNE+     E  R+    ST    +   
Sbjct: 344 QVCRSRRHSDSCCLCL-------DSMNAVIRNFNES-----ENRRNSCLGSTETYYS-KH 390

Query: 554 NTTTFKSSITERAEKCLTALKARCLTSP 637
           NT  F   I E +       K   L  P
Sbjct: 391 NTQQFTQYIPESSSNLQEKTKIDLLEIP 418


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +2

Query: 365 SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVC 463
           + G  C   EH       + DC  E  +RR +C
Sbjct: 296 TTGTKCVSGEHLSVSGGALNDCHAEVVARRCLC 328


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 210 QPPRCPRGR 184
           QPP+CPR R
Sbjct: 564 QPPQCPRFR 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,813
Number of Sequences: 438
Number of extensions: 3349
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)