Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_G19
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 292 1e-79
06_01_0425 - 3045557-3046004,3046852-3046856 29 1.9
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 29 3.4
03_05_1034 + 29870693-29870738,29870849-29871036 29 3.4
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 29 3.4
08_01_0346 - 3063440-3064189 28 5.9
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 28 5.9
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 27 7.8
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 27 7.8
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 27 7.8
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 292 bits (716), Expect = 1e-79
Identities = 143/173 (82%), Positives = 154/173 (89%)
Frame = +1
Query: 46 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 225
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 226 RIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 405
RIRELTSVVQKRFN PE VELYA+KV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 406 FIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
F+MESGA+GCEV+VSGKLR QRAKSM F G MI SG P N Y+++A RHVLL
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLL 179
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 270 SRAICRIVCSKGGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 407
++A C+ + GG P R+RPG ++ + + + T L+ PF
Sbjct: 37 TKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPF 82
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 107 SLGSWPRTAT-PAWKCGSLPSARRSLLWPPGHRVCS 211
++ SWPR P W C S RR L P R C+
Sbjct: 10 AVSSWPRLPRLPPWPCASHAQRRRVLRLLPPRRRCA 45
>03_05_1034 + 29870693-29870738,29870849-29871036
Length = 77
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 255 EAIQHSRAICRIVCSKGGY 311
E I+H+ A+C + C+KG Y
Sbjct: 21 ERIEHTEAVCTLFCAKGTY 39
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 171 RADGSDPHFHAGVAVLGQLPSEELIEFCLENPIS 70
R DG +PH A + G ++ CL P S
Sbjct: 768 RQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSS 801
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 337 AESLRYKLIGGLAVRRACYGVLR 405
A S L+GG A ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 291 VCSKGGYSWPLRYRPG-RISKIQAYRRSRCTSCLLWC 398
V + G SW RY+ ISK Y RC C++ C
Sbjct: 661 VNNAGALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 168 ADGSDPHFHAGVAVLGQLPSEELIEFCLENPISNKFSLL*N---IVHGHDCNGSREK 7
ADG PH HA A G++ E + ++ P+ +F+L + VH G+ EK
Sbjct: 56 ADGERPHGHAAEAGTGRMNLNEYM-VAVDRPLGVRFALAVDGRVFVHSLKKGGNAEK 111
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = -2
Query: 555 MSGSSVDVIIARVSRVDHESXYKXH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTY 376
+ GS +++ V R D ++ Y+ G ++ +NN +++G HD N I
Sbjct: 746 IDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGNVIGQGDQ 805
Query: 375 SETSDKLVS 349
++ +S
Sbjct: 806 DSEKNRYLS 814
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 373 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPC-NDYVNTAT 549
A R A G++ + + G G SG+ RGQ +++ + G ++ G P +Y++ A
Sbjct: 472 AARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEG-GLYQGYPVFREYLDEAL 530
Query: 550 RHVL 561
+L
Sbjct: 531 VEIL 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,966,941
Number of Sequences: 37544
Number of extensions: 332753
Number of successful extensions: 914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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