Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_G19
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 314 2e-85
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 314 2e-85
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 314 2e-85
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 314 2e-85
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 313 3e-85
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 313 3e-85
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 312 4e-85
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 312 6e-85
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 312 7e-85
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 208 1e-53
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 207 2e-53
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 170 3e-42
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 165 7e-41
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 91 3e-18
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 29 8.5
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 29 8.5
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 29 8.5
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 29 8.5
AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated p... 29 8.5
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 29 8.5
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 29 8.5
AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 29 8.5
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 29 8.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 314 bits (770), Expect = 2e-85
Identities = 156/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 313 bits (768), Expect = 3e-85
Identities = 153/173 (88%), Positives = 162/173 (93%)
Frame = +1
Query: 46 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 225
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 226 RIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 405
RIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 406 FIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
FIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 176
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 313 bits (768), Expect = 3e-85
Identities = 153/173 (88%), Positives = 162/173 (93%)
Frame = +1
Query: 46 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 225
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 226 RIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 405
RIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 406 FIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
FIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 176
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 312 bits (767), Expect = 4e-85
Identities = 155/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 312 bits (766), Expect = 6e-85
Identities = 155/178 (87%), Positives = 165/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA++VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 312 bits (765), Expect = 7e-85
Identities = 155/178 (87%), Positives = 164/178 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRAC 390
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 391 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 208 bits (507), Expect = 1e-53
Identities = 101/116 (87%), Positives = 107/116 (92%)
Frame = +1
Query: 217 KGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 396
+GRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 397 VLRFIMESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
VLRFIMESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 121
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 207 bits (506), Expect = 2e-53
Identities = 104/118 (88%), Positives = 111/118 (94%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRGLCAIAQAESLRYKLIGGLAVRR 384
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 170 bits (414), Expect = 3e-42
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +1
Query: 289 LYAQKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 468
LYA+KVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 469 RAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
RAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 92
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 165 bits (402), Expect = 7e-41
Identities = 83/96 (86%), Positives = 89/96 (92%)
Frame = +1
Query: 31 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 210
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 211 GEKGRRIRELTSVVQKRFNIPEQSVELYAQKVATRG 318
GEKGRRIRELT+VVQKRF PE SVELYA+KVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 90.6 bits (215), Expect = 3e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +1
Query: 412 MESGARGCEVVVSGKLRGQRAKSMXFVXGLMIHSGXPCNDYVNTATRHVLL 564
MESGA+GCEVVVSGKLRGQRAKSM FV GLMIHSG P N YV+TA RHVLL
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 51
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated
protein 1 protein.
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 357 AYRRSRCTSCLLW--CSPFHHGIWCP 428
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ45222 fis, clone BRCAN2019953. ).
Length = 177
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 211
GSWPR + P + S PS ++L LW R+ S
Sbjct: 83 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 116
>AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ45020 fis, clone BRAWH3016123. ).
Length = 206
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 211
GSWPR + P + S PS ++L LW R+ S
Sbjct: 112 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 145
>AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ42516 fis, clone BRACE2047385. ).
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 357 AYRRSRCTSCLLW--CSPFHHGIWCP 428
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 276 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 148
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,728,416
Number of Sequences: 237096
Number of extensions: 1849138
Number of successful extensions: 7695
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7695
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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