Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F04
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             30   0.017
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.8  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    21   7.7  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   7.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   7.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 327  QHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQCCP 220
            Q + + Q  P +QS  P+Q    PQQQ    QQ  P
Sbjct: 1508 QQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQP 1543



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 327  QHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQ 229
            Q +   Q    +Q   P+Q    PQQQ    QQ
Sbjct: 1501 QQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQ 1533



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 339  QVLYQHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQCCP 220
            +++  H S+       Q    +Q    PQQQ+   QQ  P
Sbjct: 1490 KLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQP 1529



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -1

Query: 327  QHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQ 229
            Q   +    P +Q   P+Q     QQQ    QQ
Sbjct: 1515 QQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ 1547


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 345 NIQVLYQHESKHQDVPSKQSVYP 277
           +I VLY+ ++K+   P+   +YP
Sbjct: 145 SIAVLYRPDTKYMKFPAIYEIYP 167


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 345 NIQVLYQHESKHQDVPSKQSVYP 277
           +I VLY+ ++K+   P+   +YP
Sbjct: 145 SIAVLYRPDTKYMKFPAIYEIYP 167


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 383 YL*CIIFSFLILRIFKYCINTSPSIR 306
           Y+ CII  FL   IFK   N +   R
Sbjct: 353 YIPCIIMVFLYYNIFKALRNRARKAR 378


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 357 LDFENIQVLYQ 325
           +D+EN+Q LYQ
Sbjct: 302 IDYENVQSLYQ 312


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 438 GIKKYIVGLIIKNSSDPVTMESNKVYLKK 524
           G+K+ IVG+   +S++P   E+    +KK
Sbjct: 71  GVKQLIVGVNKMDSTEPPYSETRFEEIKK 99


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 438 GIKKYIVGLIIKNSSDPVTMESNKVYLKK 524
           G+K+ IVG+   +S++P   E+    +KK
Sbjct: 87  GVKQLIVGVNKMDSTEPPYSETRFEEIKK 115


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 438 GIKKYIVGLIIKNSSDPVTMESNKVYLKK 524
           G+K+ IVG+   +S++P   E+    +KK
Sbjct: 144 GVKQLIVGVNKMDSTEPPYSETRFEEIKK 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,500
Number of Sequences: 438
Number of extensions: 3587
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)