Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D08
         (470 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   1.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   1.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   2.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   5.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   6.7  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 274 IENDCDSCSEEVIEEHSLNTDTNNLQIEE 360
           IEN   S  E + ++  ++   NNL IEE
Sbjct: 328 IENVIPSNEELICDKRFVDESANNLSIEE 356


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 274 IENDCDSCSEEVIEEHSLNTDTNNLQIEE 360
           IEN   S  E + ++  ++   NNL IEE
Sbjct: 343 IENVIPSNEELICDKRFVDESANNLSIEE 371


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +1

Query: 292 SCSEEVIEEHSLNTDTNNLQIEESGKKKPXGISSVTLRSXNKNQDH 429
           S S EV+++H+L    +       G+K P      ++   N   D+
Sbjct: 267 SVSTEVLQDHTLEKSNDYYAFHFEGEKGPNSQGPSSVIDTNTGVDY 312


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 268 LQNCLNFALQTP 233
           + NC+ FALQTP
Sbjct: 218 VSNCVLFALQTP 229


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 309 YFFRAGITVVFNFTYKIA*ILLYRLLTV--CARMN 211
           YF  A ++ +    +K + + LYR  TV   ARM+
Sbjct: 77  YFLNAKVSEIAALNHKFSSVTLYRNKTVKYSARMH 111


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 274 IENDCDSCSEE 306
           +EN+C  CSE+
Sbjct: 71  LENECSPCSEK 81


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 274 IENDCDSCSEE 306
           +EN+C  CSE+
Sbjct: 71  LENECSPCSEK 81


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 169  LSDGISKNHNKQLFTYTMHHNMRK 98
            +SD  S   + ++ T+  HHN+ K
Sbjct: 1662 ISDSESGRLDTEMSTWGYHHNVNK 1685


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,725
Number of Sequences: 438
Number of extensions: 2490
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)