Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_B02
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   194   2e-49
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   152   7e-37
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   152   7e-37
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro...    30   6.6  
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r...    30   6.6  
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r...    30   6.6  

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  194 bits (472), Expect = 2e-49
 Identities = 93/134 (69%), Positives = 106/134 (79%)
 Frame = +1

Query: 166 VNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTK 345
           VNVVEALQEFWQ+K           LV+YE VP+  PPYVCYVTLPGG+CFGSFQ CPTK
Sbjct: 98  VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157

Query: 346 AEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHXDPSAGIAAFX 525
           AEARRSAAKIALMNSVFNEH SRRI+D FIEK+V+EA ASF G+      +P+ GI AF 
Sbjct: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEA-DNPNTGIGAFR 216

Query: 526 FMLEANKGRTMLEF 567
           FMLE+NKG++MLEF
Sbjct: 217 FMLESNKGKSMLEF 230


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  152 bits (369), Expect = 7e-37
 Identities = 74/138 (53%), Positives = 97/138 (70%)
 Frame = +1

Query: 154 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 333
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 334 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHXDPSAGI 513
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 514 AAFXFMLEANKGRTMLEF 567
            A+ +MLE+N G+TMLEF
Sbjct: 143 GAYHYMLESNMGKTMLEF 160


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  152 bits (369), Expect = 7e-37
 Identities = 74/138 (53%), Positives = 97/138 (70%)
 Frame = +1

Query: 154 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 333
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 334 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHXDPSAGI 513
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 514 AAFXFMLEANKGRTMLEF 567
            A+ +MLE+N G+TMLEF
Sbjct: 143 GAYHYMLESNMGKTMLEF 160


>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 250  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 348
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 250  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 348
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 250  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 348
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,812,346
Number of Sequences: 237096
Number of extensions: 1196237
Number of successful extensions: 3268
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3265
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)