Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_L01
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.9  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 106 FINLLEAILDRYAKIKNTPHF*N*QHSIL 192
           F++ ++ I+D Y  ++NT H     H +L
Sbjct: 280 FLHKMKNIIDYYLVLENTDHTKQLSHDVL 308


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 295 RQSKNLFDSNKAVTFTISYSFLLRENGVAALKFSTKCYVAN 173
           ++  N   +N  + FT+   F + E+G  +LK      + N
Sbjct: 28  QEDSNWIITNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKN 68


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 515 LPQFQDGSIHNEPVL 559
           +P  Q G++HN+P++
Sbjct: 25  VPSSQRGNVHNDPLV 39


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 515 LPQFQDGSIHNEPVL 559
           +P  Q G++HN+P++
Sbjct: 25  VPSSQRGNVHNDPLV 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,708
Number of Sequences: 438
Number of extensions: 3199
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)