Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_F23
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   1.9  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.9  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   7.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 635 YLCDFFGCCNGFRHS 591
           ++  FFGCC   R S
Sbjct: 63  FVISFFGCCGAIRES 77


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 204 WHKILKVDMIYGE-KQFDEQXRGRRNIFKNCFDISSISIK 88
           W+ IL++ ++YGE    DE         K C   +  +I+
Sbjct: 13  WYLILQIALVYGEISDIDEFREMTSKYRKKCIGETKTTIE 52


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 373 TPLATVTPSFVIFGDPQ 323
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 635 YLCDFFGCCNGFRHSFKFLFNGIYGE 558
           Y CD  G   G+ H  K      YGE
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGE 257


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = -1

Query: 638 SYLCDFFGCCNGFRHSFKFLFNG 570
           +Y C   G C    H+ K+   G
Sbjct: 72  AYTCPICGACGDIAHTVKYCPKG 94


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 169 SINHINFQDFMP 204
           S++H++F +F+P
Sbjct: 310 SVDHVDFDEFLP 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,813
Number of Sequences: 438
Number of extensions: 2887
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)