Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_D16
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.9  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 557 FNFFNGILYYIPMTRVNNVW 498
           FN F G L Y+ +T  + VW
Sbjct: 97  FNDFGGRLKYLTLTDASRVW 116


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 557 FNFFNGILYYIPMTRVNNVW 498
           FN F G L Y+ +T  + VW
Sbjct: 97  FNDFGGRLKYLTLTDASRVW 116


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 188 KHVSHWFRKSHNMEAQEEFR 247
           KH  HWFRK   +      R
Sbjct: 21  KHTVHWFRKGLRLHDNPSLR 40


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 273 PSIPIEWLRDGQEIKVEGATVKV 341
           P   + WL+DG+ + +E A +++
Sbjct: 335 PIKTVSWLKDGKPLGLEEAVLRI 357


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 569 SYIIFNFFNGILYYIP 522
           +Y +F+F N I+Y +P
Sbjct: 147 AYCLFSFLNTIVYCVP 162


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 177 LQGTNTYLIGSENPIIWKHKKSSEDSADNELPPS 278
           +  +++ +  SE    W+ K + ED+  N L P+
Sbjct: 371 ISSSSSSISSSEENDFWQPKPTLEDAPQNSLLPN 404


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 273 PSIPIEWLRDGQ 308
           P + I WL+DGQ
Sbjct: 639 PPLTISWLKDGQ 650


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 119 YWWNHSSHSGKR 84
           Y WNH+  SG+R
Sbjct: 13  YQWNHTVSSGER 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,701
Number of Sequences: 438
Number of extensions: 4181
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)