Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_B02
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.27 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.27 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   7.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 555 YTHLYTLIVKPDNTYEVLIDNXKVES 632
           Y H Y +  KP N  E++  N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 555 YTHLYTLIVKPDNTYEVLIDNXKVES 632
           Y H Y +  KP N  E++  N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 252 KPLKMRGSMLSPVSSNRSVMRV 317
           +P   RG+++SP  + R  M+V
Sbjct: 893 EPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 252 KPLKMRGSMLSPVSSNRSVMRV 317
           +P   RG+++SP  + R  M+V
Sbjct: 931 EPYNQRGTVVSPPPTKRRTMKV 952


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 496 KITCTFLVXGPQMSGPNIISYGVSPCMSXCSSLQSKTLR 380
           +I CT++   P       +  GVS  +S   + ++ T+R
Sbjct: 214 RINCTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTIR 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,282
Number of Sequences: 438
Number of extensions: 3987
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)