Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_P12
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   1.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.0  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 190 IYSNCCRGIQQPHLCR 143
           I  NC R + +PH+CR
Sbjct: 28  IKCNCKRHVIKPHICR 43


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 152 LV*NVIACRVKTIVDYS*KKSSKNNLETETCSILCINLI 36
           L+ NVI    + I D      S NNL  E    + +NLI
Sbjct: 327 LIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLI 365


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 152 LV*NVIACRVKTIVDYS*KKSSKNNLETETCSILCINLI 36
           L+ NVI    + I D      S NNL  E    + +NLI
Sbjct: 342 LIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLI 380


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 440 FHFLDAPKEALQCFEEPANDGFFDQQVSYQILLD 541
           F FL   K      E P N G +DQ ++ + L D
Sbjct: 202 FGFLYLNKHFTNSEEAPGNMGLWDQALALRWLRD 235


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 440 FHFLDAPKEALQCFEEPANDGFFDQQVSYQILLD 541
           F FL   K      E P N G +DQ ++ + L D
Sbjct: 202 FGFLYLNKHFTNSEEAPGNMGLWDQALALRWLRD 235


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 116 LFLPCRQLHSTQVRLLYAPATIG 184
           L LPC  ++S  + + Y P+  G
Sbjct: 220 LILPCILINSVALLVFYVPSESG 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,204
Number of Sequences: 438
Number of extensions: 3727
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)