Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N17
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 1.9
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.4
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 55 FSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSV-----VTIKEQCKTIWRMAAAT 219
++Y+NN L+ YN+N + + YY F ++I+EQ + +T
Sbjct: 97 YNYNNNNYNKKLY--YNINYIEQIPIPVPVYYGNFLPRPMGPWISIQEQIPRFRHIGPST 154
Query: 220 PIPMCHRPNSW 252
P P PN++
Sbjct: 155 PFPRFIPPNAY 165
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 55 FSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSV-----VTIKEQCKTIWRMAAAT 219
++Y+NN L+ YN+N + + YY F ++I+EQ + +T
Sbjct: 97 YNYNNNNYNKKLY--YNINYIEQIPIPVPVYYGNFLPRPMGPWISIQEQIPRFRHIGPST 154
Query: 220 PIPMCHRPNSW 252
P P PN++
Sbjct: 155 PFPRFIPPNAY 165
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 55 FSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSV-----VTIKEQCKTIWRMAAAT 219
++Y+NN L+ YN+N + + YY F ++I+EQ + +T
Sbjct: 97 YNYNNNNYNKKLY--YNINYIEQIPIPVPVYYGNFLPRPMGPWISIQEQIPRFRHIGPST 154
Query: 220 PIPMCHRPNSW 252
P P PN++
Sbjct: 155 PFPRFIPPNAY 165
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 55 FSYDNNFCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSV-----VTIKEQCKTIWRMAAAT 219
++Y+NN L+ YN+N + + YY F ++I+EQ + +T
Sbjct: 97 YNYNNNNYNKKLY--YNINYIEQIPIPVPVYYGNFLPRPMGPWISIQEQIPRFRHIGPST 154
Query: 220 PIPMCHRPNSW 252
P P PN++
Sbjct: 155 PFPRFIPPNAY 165
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 YNLNEVNNVQCCEFYYYFVFC-----SVVTIKEQCKTIWRMAAATPIPMCHRPNSWSI 258
YN+N + + YY F S ++I+EQ + +TP P PN++ +
Sbjct: 104 YNINYIEQIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPPNAYRL 161
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 YNLNEVNNVQCCEFYYYFVFC-----SVVTIKEQCKTIWRMAAATPIPMCHRPNSWSI 258
YN+N + + YY F S ++I+EQ + +TP P PN++ +
Sbjct: 104 YNINYIEQIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPPNAYRL 161
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 YNLNEVNNVQCCEFYYYFVFC-----SVVTIKEQCKTIWRMAAATPIPMCHRPNSWSI 258
YN+N + + YY F S ++I+EQ + +TP P PN++ +
Sbjct: 104 YNINYIEQIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPPNAYRL 161
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 YNLNEVNNVQCCEFYYYFVFC-----SVVTIKEQCKTIWRMAAATPIPMCHRPNSWSI 258
YN+N + + YY F S ++I+EQ + +TP P PN++ +
Sbjct: 104 YNINYIEQIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPPNAYRL 161
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 YNLNEVNNVQCCEFYYYFVFC-----SVVTIKEQCKTIWRMAAATPIPMCHRPNSWSI 258
YN+N + + YY F S ++I+EQ + +TP P PN++ +
Sbjct: 104 YNINYIEQIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPPNAYRL 161
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.4
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = +1
Query: 58 SYDNNFCVCSLFFFYNLNEVNNVQC-------CEFYYYFVFCSVVTIKEQCKTIWRMAAA 216
+Y+NN+ + +YN+N + + C + ++I+EQ + +
Sbjct: 96 NYNNNYNNYNKKLYYNINYIEQIPVPVPVPVYCGNFPPRPMGPWISIQEQIPRFRHIGPS 155
Query: 217 TPIPMCHRPNSW 252
TP P PN++
Sbjct: 156 TPFPRFISPNAY 167
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTN 230
+NN ND NG G +N N
Sbjct: 247 NNNNNNGANDNGNGNGASNNN 267
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,716
Number of Sequences: 438
Number of extensions: 3858
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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