Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N01
         (327 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   1.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.9  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   3.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 115  RPSIHYHKGYCPFACREFTMD 177
            RP + Y K +  F CR+  +D
Sbjct: 994  RPDLEYGKVWLFFGCRQRNLD 1014


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = +1

Query: 22   KAKTIKYXCF------LNLMSNIEQGSNGGANIKPVA 114
            K+K  K+ C       + L   IE+G+N   + KPV+
Sbjct: 1721 KSKPYKFHCMEKNEAAMKLKKRIEKGANPDLSQKPVS 1757


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 318 PSSYGLPRYXYWMSMLT 268
           P+S+GL    YW+  +T
Sbjct: 477 PASFGLLNICYWVIYVT 493


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 52  LNLMSNIEQGSNGGANIK 105
           LN++ N+ +GS+   N K
Sbjct: 361 LNMLGNVIEGSSDSINTK 378


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 97  WPPHYFLALYY 65
           W P+Y ++L+Y
Sbjct: 273 WTPYYVMSLWY 283


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 122 VFIITKAIAHLLVG 163
           +FI++ A+A L+VG
Sbjct: 102 MFIVSLAVADLMVG 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,580
Number of Sequences: 438
Number of extensions: 1777
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)