Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M09
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.90 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.90 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 323 EIGRGKFGTVYLC 361
           EIGRG++G V+ C
Sbjct: 599 EIGRGQYGIVFAC 611


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 323 EIGRGKFGTVYLC 361
           EIGRG++G V+ C
Sbjct: 637 EIGRGQYGIVFAC 649


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
 Frame = +1

Query: 238  GEIEPPXPVSRCHDQKKHGC-----EREL*DALGNRTRQI-RNSILVQRKEHGSGTGRQA 399
            G  EPP P  R HDQ            E+ +A  +R + + RN  +  R + G  T    
Sbjct: 1855 GSPEPPPPPPRNHDQNNSSFNDSKESNEISEAECDRDQLVNRNYGVNARGKDGMTTEEMR 1914

Query: 400  RPXEQ-EGRETQCGTGGG 450
            +  E+ E    Q G+G G
Sbjct: 1915 KLIERNEAPSRQTGSGHG 1932


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 239  ERSSPRFPCRDVTIKRNTDVNENYEMLSEIGRG 337
            E  +P+    + T K+        EM+ E GRG
Sbjct: 1152 ENWTPKMMAVEPTDKQANSKTRRQEMMREAGRG 1184


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 394  QARPXEQEGRETQCGTGG 447
            QA+P  QE  + +  TGG
Sbjct: 1013 QAKPQSQEANKPKPATGG 1030


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,592
Number of Sequences: 438
Number of extensions: 2837
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)