Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_L23
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   3.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.6  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.2  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 314 TCSVRVQVYDPVT 352
           +CSV  +V+DPVT
Sbjct: 48  SCSVSWEVHDPVT 60


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 162 FLKGKRDLCHCYNVYEYKIK 103
           ++ G++   HC+N  +Y+I+
Sbjct: 599 YVAGEQCCWHCFNCTQYQIR 618


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -3

Query: 235 TKFFPVNDIVS 203
           +KFFPV++I+S
Sbjct: 57  SKFFPVSEILS 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,251
Number of Sequences: 438
Number of extensions: 1999
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)