Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_L22
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 35 7e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 34 0.001
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.026
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.43
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 5.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 5.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.0
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.2
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 34.7 bits (76), Expect = 7e-04
Identities = 34/117 (29%), Positives = 54/117 (46%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 464
+ + E + + I + ++ K + + +ID+PGH DF + D A
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/117 (29%), Positives = 54/117 (46%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 464
+ + E + + I + ++ K + + +ID+PGH DF + D A
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.026
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 141 MSVIAHVDHGKSTLTDSL 194
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 372 EKGFLINLIDSPGHVDFSSEVTAALRVTD 458
E G + +D+PGH F S +TD
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITD 218
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.43
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 138 NMSVIAHVDHGKSTLTDSL 194
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 381 FLINLIDSPGHVDFSSEVTAALRVTDGA 464
+ + +ID+PGH DF + D A
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCA 39
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 381 FLINLIDSPGHVDFSSEVTAALRVTDGA 464
+ + +ID+PGH DF + D A
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCA 55
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 119 VHHPTDLVYREIHH 78
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 478 DCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLEL 591
DC C+Q +R+ + K ++F+ ++R EL
Sbjct: 3 DCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEEL 40
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 300 ISMFFELEEKDLVFITNPDQREKSEKGFLI 389
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 300 ISMFFELEEKDLVFITNPDQREKSEKGFLI 389
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/30 (26%), Positives = 13/30 (43%)
Frame = +2
Query: 446 PCH*WSPCGLLTVCLVCVYKLKQYCVRLLP 535
PC W C +T +CV ++ +P
Sbjct: 487 PCCWWKICWTITTPAICVGVFTFNIIKFVP 516
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/30 (26%), Positives = 13/30 (43%)
Frame = +2
Query: 446 PCH*WSPCGLLTVCLVCVYKLKQYCVRLLP 535
PC W C +T +CV ++ +P
Sbjct: 540 PCCWWKICWTITTPAICVGVFTFNIIKFVP 569
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 276 CITIKSTAISMFF 314
C T+K +A+ M+F
Sbjct: 688 CATVKGSAVDMYF 700
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 515 TVSVCTHTPDTQSTNHKGSISDTECSCYFRREI 417
T +C D S H G S C +FRR I
Sbjct: 63 TTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSI 95
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 506 VCTHTPDTQSTNHKGSISDTECSCYFRREI 417
+C+ D S H G S C +F+R +
Sbjct: 109 LCSICGDRASGKHYGVYSCEGCKGFFKRTV 138
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 506 VCTHTPDTQSTNHKGSISDTECSCYFRREI 417
+C+ D S H G S C +F+R +
Sbjct: 109 LCSICGDRASGKHYGVYSCEGCKGFFKRTV 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,105
Number of Sequences: 438
Number of extensions: 3417
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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