Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K19
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   9.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.6  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    20   9.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +1

Query: 220  SSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRN 360
            S+  V  +   G  +V +G+Q  G      +QP T++  +  +  +N
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  LNHNKSTLTLFRHHXI 4
           LNH  S++TL+R+  +
Sbjct: 89  LNHKFSSVTLYRNKTV 104


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 251 SHTIGTTGPELMYFTRPGKK 192
           +H  G+T     YF+RP +K
Sbjct: 88  NHLYGSTPDSRDYFSRPFEK 107


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -3

Query: 71  PRCTPSGLTIIKVRSRCSAIM 9
           P C P  +     R RCS+ +
Sbjct: 41  PGCVPKPIPSYACRGRCSSYL 61


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 109 GFKLVGLKFVWPSE 150
           GF++   K +WPS+
Sbjct: 203 GFRVDAAKHMWPSD 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,960
Number of Sequences: 438
Number of extensions: 2086
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)