Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K07
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   2.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.9  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   7.9  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 49  LSENHLSQRLASC 11
           L E HL+QR+ SC
Sbjct: 121 LKEKHLTQRINSC 133


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 294 KVLASSQCCW 265
           K +A  QCCW
Sbjct: 598 KYVAGEQCCW 607


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 43 ENHLSQRLASC 11
          E HL+QR+ SC
Sbjct: 2  EKHLTQRINSC 12


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 43 ENHLSQRLASC 11
          E HL+QR+ SC
Sbjct: 2  EKHLTQRINSC 12


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,097
Number of Sequences: 438
Number of extensions: 1823
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)