Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_H09
         (401 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   2.3  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   4.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.9  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   6.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   9.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 120 YTIRLNHNKSTLTLFRHHEILLTCSI 43
           Y +  + +K T T+  +H I L CS+
Sbjct: 61  YPLPYSGSKCTWTITSYHRINLKCSL 86


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 87  LTLFRHHEILLTCSIN 40
           L + +HH  +  CS+N
Sbjct: 123 LQMTKHHNFIKVCSVN 138


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +1

Query: 277  SSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDL 396
            S+  V  +   G  +V +G+Q  G      +QP T++  +
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQI 948


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 128 PRCTPSGLTIIKVRSRCSAIMK 63
           P C P  +     R RCS+ ++
Sbjct: 41  PGCVPKPIPSYACRGRCSSYLQ 62


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 108 LNHNKSTLTLFRHHEI 61
           LNH  S++TL+R+  +
Sbjct: 89  LNHKFSSVTLYRNKTV 104


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 308 SHTIGTTGPELMYFTRPGKK 249
           +H  G+T     YF+RP +K
Sbjct: 88  NHLYGSTPDSRDYFSRPFEK 107


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 166 GFKLVGLKFVWPSE 207
           GF++   K +WPS+
Sbjct: 203 GFRVDAAKHMWPSD 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,859
Number of Sequences: 438
Number of extensions: 2197
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)