Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G19
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   161   9e-40
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   161   9e-40
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   129   3e-30

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  161 bits (390), Expect = 9e-40
 Identities = 81/159 (50%), Positives = 105/159 (66%)
 Frame = +2

Query: 119 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 298
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 299 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 478
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 479 LLVTGPFAFNSCPLRRIPXRYVICTSTRISLGNFKLPKH 595
           LLVTGPFA NSCPLRR+  RYVI TS+++ LG FK+P+H
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEH 181


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  161 bits (390), Expect = 9e-40
 Identities = 81/159 (50%), Positives = 105/159 (66%)
 Frame = +2

Query: 119 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 298
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 299 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 478
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 479 LLVTGPFAFNSCPLRRIPXRYVICTSTRISLGNFKLPKH 595
           LLVTGPFA NSCPLRR+  RYVI TS+++ LG FK+P+H
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEH 181


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  129 bits (311), Expect = 3e-30
 Identities = 72/159 (45%), Positives = 99/159 (62%)
 Frame = +2

Query: 119 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 298
           N  L  G++R+SK++M+ ++A Y+               + VV++           VP+K
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63

Query: 299 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 478
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 64  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123

Query: 479 LLVTGPFAFNSCPLRRIPXRYVICTSTRISLGNFKLPKH 595
           LLVTGPFA NSCPLRR+  RYVI TS+++ LG FK+P+H
Sbjct: 124 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEH 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,204,108
Number of Sequences: 53049
Number of extensions: 601230
Number of successful extensions: 1446
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)