Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F07
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 228 1e-59
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 228 1e-59
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 228 1e-59
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 228 1e-59
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 228 1e-59
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 228 1e-59
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 73 4e-13
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 30 3.9
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 30 3.9
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 30 3.9
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 30 3.9
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 30 3.9
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 30 3.9
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 30 3.9
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 30 3.9
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 30 3.9
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 30 3.9
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 156
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 228 bits (557), Expect = 1e-59
Identities = 112/154 (72%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Frame = +2
Query: 44 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN-KKSIIIYV 220
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKE E+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 221 PMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 400
P+P+LK+F KIQ+RLVRELEKKFSGKHV F+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 401 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 73.3 bits (172), Expect = 4e-13
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2
Query: 383 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LI VHL
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 49
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQG----IMELIESIPKPEPVTEVSAPVK 806
Query: 374 RPRSRTLTSVYDAILEDLVFP 436
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,751,563
Number of Sequences: 237096
Number of extensions: 1200920
Number of successful extensions: 2392
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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