Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F07
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    26   0.25 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   5.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 80  DSFETSISQALVELETNSDLKAQLRE 157
           ++  T++S AL EL  N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 16/83 (19%), Positives = 34/83 (40%)
 Frame = +2

Query: 170 KAKEXELHNKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHK 349
           +  + EL   KS +  +P+P  +    +      + +KK +G    F   +        +
Sbjct: 547 ETNKQELKRLKSTVSLLPLPLARTPSVMSASSTCKKDKKNAGSGSRFTIYKANKASKKKR 606

Query: 350 TRVANKQKRPRSRTLTSVYDAIL 418
            + + K++R  ++TL  V    L
Sbjct: 607 EKSSAKKERKATKTLAIVLGVFL 629


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +1

Query: 16  FPSRKVVNDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 156
           FP+    +DE  +   +R       D D+AG  + ++++ P    SG
Sbjct: 104 FPNSSSSDDERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPLLMQSG 150


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 228 GIGT*MMIDFLLCSSISLAFVMXSSRSWALRSELVSSS 115
           G+ T +++  L+C SIS          W L  E +  S
Sbjct: 416 GLITGLIMRVLICGSISEEQKFDDEAHWELEEESLQGS 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,856
Number of Sequences: 438
Number of extensions: 2207
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)