Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D23
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   1.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   1.5  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.9  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 VLPCAHAYHSACIDPWL 338
           +LP   A   +CIDPW+
Sbjct: 319 MLPAVFAKTVSCIDPWI 335


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 VLPCAHAYHSACIDPWL 338
           +LP   A   +CIDPW+
Sbjct: 319 MLPAVFAKTVSCIDPWI 335


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 575 TSASALFWLFXARNL 531
           T+ SA FWL   RN+
Sbjct: 112 TTVSARFWLMDCRNI 126


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 244 HVSYGSPLLNLHVGIFESARC 182
           HV    PLL++H+G     RC
Sbjct: 332 HVEVTPPLLSVHLGGNAEFRC 352


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 244 HVSYGSPLLNLHVGIFESARC 182
           HV    PLL++H+G     RC
Sbjct: 332 HVEVTPPLLSVHLGGNAEFRC 352


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = -2

Query: 205 GIFESARCGKRCLLALRLSFIHFTIININMTSRQSTTTI 89
           G+ E  RC  RC+  L L  +      + +       TI
Sbjct: 474 GLPEPCRCHARCIARLALDMMDLAADEVQIDGEPVKITI 512


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 311 VSVGAGQHAQAVPLLVVVKADG 246
           V+  +G HA + PLL    A G
Sbjct: 513 VAPPSGHHASSAPLLAATLAGG 534


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = -2

Query: 205 GIFESARCGKRCLLALRLSFIHFTIININMTSRQSTTTI 89
           G+ E  RC  RC+  L L  +      + +       TI
Sbjct: 474 GLPEPCRCHARCIARLALDMMDLAADEVQIDGEPVKITI 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,837
Number of Sequences: 438
Number of extensions: 1857
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)