Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D21
         (402 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   5.3  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   5.3  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   5.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   6.9  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    20   9.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   9.2  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +3

Query: 201 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 347
           N    E   R+ R +S+  +RDR++  +  +H+      N  +    N+
Sbjct: 48  NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +3

Query: 201 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 347
           N    E   R+ R +S+  +RDR++  +  +H+      N  +    N+
Sbjct: 48  NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +3

Query: 201 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 347
           N    E   R+ R +S+  +RDR++  +  +H+      N  +    N+
Sbjct: 48  NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 40  LRSTKPSRKSVFSGSSLTGELISISSLXMPNE 135
           L  T   +K     S  TGE   ISS  +PN+
Sbjct: 127 LSVTSMIQKRALGPSFSTGERCRISSNFLPNK 158


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 216 EAASRQERGSSE*EARDREDSLEKHDHR 299
           E + R+ R +S+  +RDR +     +HR
Sbjct: 286 ENSYRKYRETSKERSRDRRERGRSREHR 313


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 4/8 (50%), Positives = 7/8 (87%)
 Frame = +2

Query: 188 LNVNQWHW 211
           +N++ WHW
Sbjct: 205 INLHHWHW 212



 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 261 RDREDSLEKHDHRSRDGRFNCRHL 332
           +DR   L  + H+    R+NC  L
Sbjct: 227 KDRRGELFYYMHQQIMARYNCERL 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,927
Number of Sequences: 438
Number of extensions: 1492
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)