Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D18
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    27   0.13 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.41 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.41 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 202 TPHKHVHTYTYMIGHCHSGPLAH 134
           TPH H H++     H HS PLAH
Sbjct: 429 TPHHH-HSHAATPHHQHSTPLAH 450



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 202 TPHKHVHTYTYMIGHCHSGPLAH*CHNA 119
           TP  H HT  +   H H+ P  H  H A
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAA 438


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 221 PKSFVVASGALHPGSGRAFMAQPR 292
           P S +VASG  H G  ++  AQP+
Sbjct: 919 PGSGIVASGQQHAGGWQSIYAQPQ 942


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
 Frame = -1

Query: 250 GSAGHHERFRSRAQPKT--PHKHVHTYTYMIGHCH 152
           GS+ HH+       P    PH H H  T  + H H
Sbjct: 331 GSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLH 365


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 165 IIYVYVCTCLCGVLGWARDRNRSWWPAEPYTRARAELSWLSLGTTRASTAE 317
           + + Y+ TCL  ++ W      S+W       AR  L   SL T     A+
Sbjct: 248 LFHTYIPTCLIVIMSWV-----SFWIKPEAAPARVTLGVTSLLTLSTQHAK 293


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 294 TTRASTAEVTWRGERCTTSTG*PIPTWLQCTT 389
           T   + + +TW G   T   G  IPT L+  T
Sbjct: 387 TLSVNESNITWPGRLQTKPEGFMIPTHLKVLT 418


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 301 EPPRRRLHGGGSDVPRAQA 357
           +PP ++LH   S  P+AQA
Sbjct: 808 QPPHQQLHHHQSTHPQAQA 826



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 443  SCGLVVP-RGGRERVLPAGGSALEPGGDGSACARGTSLPPPCNLRRGGSR 297
            S G  VP R  R   +    S  + G +     R TS P P ++ R GSR
Sbjct: 1360 SGGRPVPERPERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRAGSR 1409


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 305  LHGGGYMEGGAMYHEHRLT 361
            LH    +    MYHEH +T
Sbjct: 1730 LHPNNTLLHSFMYHEHAMT 1748


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 305  LHGGGYMEGGAMYHEHRLT 361
            LH    +    MYHEH +T
Sbjct: 1726 LHPNNTLLHSFMYHEHAMT 1744


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 446 LSCGLVVPRGG 414
           L+CG V+P+GG
Sbjct: 132 LTCGPVMPQGG 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,940
Number of Sequences: 438
Number of extensions: 4917
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)