Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D14
         (374 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.3  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   8.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.3  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 2   ELDFRTSDRRACVGWIANDTSSFLFPSSKSVCLLPSGT 115
           ++D   SDR +     A D+ + +  + + + L+PSG+
Sbjct: 346 DIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGS 383


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 268 YYSSKAAFKLVAVAFST*NRYSV 200
           YY+ K A  +  +   T N+Y V
Sbjct: 440 YYTYKGAHSISEIMSGTSNKYGV 462


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 263 VVHLLVXNIXIAVSTYQAIKM 325
           ++H+L   I + +  YQA K+
Sbjct: 129 LLHMLTTTITLTLLAYQATKI 149


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 268 YYSSKAAFKLVAVAFST*NRYSV 200
           YY+ K A  +  +   T N+Y V
Sbjct: 440 YYTYKGAHSISEIMSGTSNKYGV 462


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 29  RACVGWIANDTSSFLFPSSKSVCLLP 106
           R C G++A +   +    +  VCL P
Sbjct: 417 RGCSGFVAFNGDQYDLKKNLKVCLPP 442


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,074
Number of Sequences: 438
Number of extensions: 1416
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)