Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_C07
(423 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000198-1|AAH00198.1| 86|Homo sapiens splicing factor 3b, sub... 164 1e-40
AL031390-2|CAI19755.1| 86|Homo sapiens splicing factor 3b, sub... 164 1e-40
U87408-1|AAB47568.1| 453|Homo sapiens unknown protein. 32 0.69
BC103831-1|AAI03832.1| 887|Homo sapiens Bardet-Biedl syndrome 9... 32 0.69
AF095771-1|AAD25981.1| 802|Homo sapiens PTH-responsive osteosar... 32 0.69
U85995-1|AAB61919.1| 429|Homo sapiens unknown protein. 30 3.7
BC128511-1|AAI28512.1| 1102|Homo sapiens KIAA0999 protein protein. 29 8.5
BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein. 29 8.5
AB209327-1|BAD92564.1| 991|Homo sapiens KIAA0999 protein varian... 29 8.5
AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein. 29 8.5
>BC000198-1|AAH00198.1| 86|Homo sapiens splicing factor 3b,
subunit 5, 10kDa protein.
Length = 86
Score = 164 bits (398), Expect = 1e-40
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +1
Query: 142 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 321
M +RY IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL+YFAI ENES
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES 60
Query: 322 KARVKFNLMERMLQPCGPPPEKPED 396
KARV+FNLME+MLQPCGPP +KPE+
Sbjct: 61 KARVRFNLMEKMLQPCGPPADKPEE 85
>AL031390-2|CAI19755.1| 86|Homo sapiens splicing factor 3b,
subunit 5, 10kDa protein.
Length = 86
Score = 164 bits (398), Expect = 1e-40
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +1
Query: 142 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 321
M +RY IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL+YFAI ENES
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES 60
Query: 322 KARVKFNLMERMLQPCGPPPEKPED 396
KARV+FNLME+MLQPCGPP +KPE+
Sbjct: 61 KARVRFNLMEKMLQPCGPPADKPEE 85
>U87408-1|AAB47568.1| 453|Homo sapiens unknown protein.
Length = 453
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQH-RDSCCSYMGHPDLLSYFAIVE 312
+K +RY I S E + ++ T E+ Q +D CS+ G L YF +++
Sbjct: 159 SKTSQRYRIQS--EQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELID 216
Query: 313 NESKARVKFNLMERML 360
+ + R+ +E +L
Sbjct: 217 HHFELRINGEKLEELL 232
>BC103831-1|AAI03832.1| 887|Homo sapiens Bardet-Biedl syndrome 9
protein.
Length = 887
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQH-RDSCCSYMGHPDLLSYFAIVE 312
+K +RY I S E + ++ T E+ Q +D CS+ G L YF +++
Sbjct: 593 SKTSQRYRIQS--EQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELID 650
Query: 313 NESKARVKFNLMERML 360
+ + R+ +E +L
Sbjct: 651 HHFELRINGEKLEELL 666
>AF095771-1|AAD25981.1| 802|Homo sapiens PTH-responsive
osteosarcoma B1 protein protein.
Length = 802
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQH-RDSCCSYMGHPDLLSYFAIVE 312
+K +RY I S E + ++ T E+ Q +D CS+ G L YF +++
Sbjct: 508 SKTSQRYRIQS--EQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELID 565
Query: 313 NESKARVKFNLMERML 360
+ + R+ +E +L
Sbjct: 566 HHFELRINGEKLEELL 581
>U85995-1|AAB61919.1| 429|Homo sapiens unknown protein.
Length = 429
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQH-RDSCCSYMGHPDLLSYFAIVE 312
+K +RY I S E + ++ T E+ Q +D CS+ G L YF +++
Sbjct: 135 SKTSQRYRIQS--EQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELID 192
Query: 313 NESKARVKFNLMERML 360
+ + R+ + +L
Sbjct: 193 HHFELRINGEKLXELL 208
>BC128511-1|AAI28512.1| 1102|Homo sapiens KIAA0999 protein protein.
Length = 1102
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 226 YEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKPEDXTL 405
++ L Q +DS C P L A EN+ A + L +QP PPP P +
Sbjct: 528 HQILQQQIQDSICPPQPSPPLQ---AACENQP-ALLTHQLQRLRIQPSSPPPNHPNNHLF 583
Query: 406 R 408
R
Sbjct: 584 R 584
>BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein.
Length = 1203
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 226 YEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKPEDXTL 405
++ L Q +DS C P L A EN+ A + L +QP PPP P +
Sbjct: 629 HQILQQQIQDSICPPQPSPPLQ---AACENQP-ALLTHQLQRLRIQPSSPPPNHPNNHLF 684
Query: 406 R 408
R
Sbjct: 685 R 685
>AB209327-1|BAD92564.1| 991|Homo sapiens KIAA0999 protein variant
protein.
Length = 991
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 226 YEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKPEDXTL 405
++ L Q +DS C P L A EN+ A + L +QP PPP P +
Sbjct: 357 HQILQQQIQDSICPPQPSPPLQ---AACENQP-ALLTHQLQRLRIQPSSPPPNHPNNHLF 412
Query: 406 R 408
R
Sbjct: 413 R 413
>AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein.
Length = 1371
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 226 YEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKPEDXTL 405
++ L Q +DS C P L A EN+ A + L +QP PPP P +
Sbjct: 737 HQILQQQIQDSICPPQPSPPLQ---AACENQP-ALLTHQLQRLRIQPSSPPPNHPNNHLF 792
Query: 406 R 408
R
Sbjct: 793 R 793
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,073,727
Number of Sequences: 237096
Number of extensions: 931269
Number of successful extensions: 1927
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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