Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_C07
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.81 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   5.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.5  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   10.0 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    20   10.0 
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    20   10.0 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   10.0 

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 PDLLSYFAIVENESKARVKFNLM 348
           P+LL YFA +    K + + NL+
Sbjct: 830 PNLLRYFASIATNPKEQAQLNLL 852


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 260 QESRCWFISHSYFV 219
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 107 TISTSILPLKIKWVKD 154
           +++   LPL I W+KD
Sbjct: 633 SVTRGDLPLSISWLKD 648


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/37 (24%), Positives = 14/37 (37%)
 Frame = +1

Query: 118 KHLAFKNKMGERYNIHSQLEHLQSKYIGTGHADTTKY 228
           K+    N +G R     +     S+Y  + H D   Y
Sbjct: 209 KYAISSNSLGSRSRSFQRTSSCHSRYEDSRHEDRNSY 245


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 256 SCCSYMGHPDLLSYFAI 306
           S CSYM H  L   F++
Sbjct: 339 SSCSYMAHEKLSYAFSV 355


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 364 PCGPPPEKPEDXTL 405
           PC  PP  P++ T+
Sbjct: 313 PCTQPPSAPQNLTV 326


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 376 PPEKPEDXTLRL 411
           PP +P D  LRL
Sbjct: 237 PPSRPTDKALRL 248


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  LN*NINFSSLYDFNKHLAFKNKMGERYNIH 165
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 125 LPLKIKWVKDTTFT 166
           LP    W KDTT T
Sbjct: 392 LPAPANWKKDTTRT 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,900
Number of Sequences: 438
Number of extensions: 1874
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)