Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_C01
(384 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 178 2e-46
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 176 1e-45
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 149 1e-37
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 144 6e-36
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 139 1e-34
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 126 1e-30
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 74 7e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 73 2e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 67 8e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 66 2e-12
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 65 4e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 59 2e-10
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 57 1e-09
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 53 2e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 50 9e-08
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 50 1e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 49 3e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 48 5e-07
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 32 0.027
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 0.44
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 27 0.76
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 27 1.0
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 1.3
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 26 2.3
SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ... 25 3.1
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 25 4.1
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 5.4
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 24 7.1
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 24 9.4
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 24 9.4
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 24 9.4
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 178 bits (434), Expect = 2e-46
Identities = 79/92 (85%), Positives = 88/92 (95%)
Frame = +2
Query: 101 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 280
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ VELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQ 64
Query: 281 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
EDYDRLRPLSYPD+ VIL+CF+VDSPDSL+N+
Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDSLDNV 96
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 176 bits (428), Expect = 1e-45
Identities = 76/92 (82%), Positives = 88/92 (95%)
Frame = +2
Query: 101 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 280
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ +ELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQ 64
Query: 281 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
EDYDRLRPLSYPD+ V+L+CFSVD+P+SL+N+
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPESLDNV 96
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 149 bits (362), Expect = 1e-37
Identities = 68/102 (66%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Frame = +2
Query: 77 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQV 250
+ SG + KKLV+VGDG CGKTCLLIVFS FPE YVPTVFENY+ DI + K +
Sbjct: 5 KKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVI 64
Query: 251 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
ELALWDTAGQE+YDRLRPLSYP+++VIL+CFS+D P SL N+
Sbjct: 65 ELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNV 106
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 144 bits (348), Expect = 6e-36
Identities = 64/92 (69%), Positives = 77/92 (83%)
Frame = +2
Query: 101 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 280
IR+KLV+VGDGACGKT LL VF+ FP YVPTVFENYV+D VDGK V+LALWDTAGQ
Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQ 66
Query: 281 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
E+Y+RLRP+SY +IL+ F++DSPDSLEN+
Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDSLENV 98
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 139 bits (337), Expect = 1e-34
Identities = 62/92 (67%), Positives = 77/92 (83%)
Frame = +2
Query: 101 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 280
I +K+VI+GDGA GKT LL VF+K FP+VY PT+FENY+ DI VDG +EL+LWDTAGQ
Sbjct: 12 IYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQ 71
Query: 281 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
E+YD+LR LSY DT VI++CF+VDS DSLEN+
Sbjct: 72 EEYDQLRSLSYSDTHVIMICFAVDSRDSLENV 103
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 126 bits (304), Expect = 1e-30
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 289
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + + L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDY 64
Query: 290 DRLRPLSYPDTDVILMCFSVDSPDSLENI 376
DRLRPLSYP TDV L+CFSV SP S EN+
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVTSPASFENV 93
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 74.1 bits (174), Expect = 7e-15
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 286
KL+++GD GK+CLL+ FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+ + Y IL+ + V S +N+
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNV 100
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 72.5 bits (170), Expect = 2e-14
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 286
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + E++GK V+L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+ + Y I++ + V DS N+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNV 99
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 67.3 bits (157), Expect = 8e-13
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 286
K+VI+GD GKTCL+ F +F Y T+ +++ D+ VD K V L LWDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+ L Y D ++ ++V++ S +++
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSV 99
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 65.7 bits (153), Expect = 2e-12
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +2
Query: 92 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVD-GKQVELALW 265
+ I +KLV++GD A GK+ L++ F KDQF + T+ ++ + +D V+L +W
Sbjct: 10 VVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIW 69
Query: 266 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLE 370
DTAGQE Y L P+ Y + + ++ + + SLE
Sbjct: 70 DTAGQERYKSLAPMYYRNANCAIVVYDITQAASLE 104
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 64.9 bits (151), Expect = 4e-12
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 289
KLV+VGDG GK+ L I + F + Y PT+ ++Y E+DG+ L + DTAGQE+Y
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEY 69
Query: 290 DRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+R + L+ +++ S S + I
Sbjct: 70 SAMREQYMRTGEGFLLVYNITSRSSFDEI 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 59.3 bits (137), Expect = 2e-10
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +2
Query: 98 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDT 271
++RK KLV +G+ + GKT L+ F DQF Y T+ ++++ + ++ + V L LWDT
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 272 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLEN 373
AGQE + L P D+ V ++ + + + +S N
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN 101
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 56.8 bits (131), Expect = 1e-09
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 286
K++I+G+ GKT ++ + +F + Y T+ +++ ++ VD K V L LWDTAGQE
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+ L Y D ++ + V++ S E +
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETL 99
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 52.8 bits (121), Expect = 2e-08
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 286
K V++GD GK+ LL+ F++++F T+ + +I +D K+++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
Y + Y L+ + + S +N+
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV 101
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.4 bits (115), Expect = 9e-08
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 286
K+ ++GD + GKT L++ + + F E T+ N++ I + ++ ++WD GQ +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
+ + P+ D IL F + +L +I
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSI 101
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 50.0 bits (114), Expect = 1e-07
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 92 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 268
MA I+ +++ ++G + GK+ L + + ++ F E Y PT+ + +I+ G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 269 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
TAGQ++Y L ++ +S+ S S E +
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMV 96
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 48.8 bits (111), Expect = 3e-07
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 274
K+V+ G GK+CLL F K+Q+ + TV ++ + I G K+++L +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 275 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 376
GQE + + Y ++ + V + DS E +
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 48.0 bits (109), Expect = 5e-07
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 110 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 286
KLV+VGDG GKT + +F + Y+ T+ E + + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 287 YDRLRPLSYPDTDVILMCFSVDSPDSLENIP 379
LR Y ++ F V S + +N+P
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVP 101
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 32.3 bits (70), Expect = 0.027
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 119 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRL 298
+VG +CGKT LL F + + TV V +E Q L L G+ D D L
Sbjct: 426 VVGSKSCGKTALLSSFINNNTNRLTPNTV----VNSVEFQSTQRYLVL-SEIGETDLDIL 480
Query: 299 -RPLSYPDTDVILMCFSVDSPDSLENI 376
P S D++ + + +P+S I
Sbjct: 481 AEPKSLEACDILCLLYDSSNPNSFSFI 507
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 0.44
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 17 DEQRRLKKVSIKPIFRXN*PESSGPMAAIRKK--LVIVGDGACGKTCLL 157
D +R+ + + I + P + I KK ++VGD A GKTC+L
Sbjct: 1838 DVERQKTLLDSQNILQSQLPVLESVITCINKKWPCILVGDTATGKTCIL 1886
Score = 24.2 bits (50), Expect = 7.1
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = +2
Query: 104 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYV 196
++ +++VGD CGKT + + ++ E+++
Sbjct: 1186 KEPVLLVGDTGCGKTTVCQILAECLHKELHI 1216
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.5 bits (58), Expect = 0.76
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 273 AVSHRASSTCFPSTSMSAT*FSNTVGTYTSGN*SLLNTISR 151
A S+ ++S +PSTSMSA+ S + TS + S ++ SR
Sbjct: 500 ATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSR 540
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 27.1 bits (57), Expect = 1.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 271 GIPQSQFHLFSIHFDVGNVILKHCRHVYFRELILAEH 161
G QS+ +IH + +++H ++ YF++L+ +H
Sbjct: 325 GSLQSEHTSLNIHTGLAETLVQHTKNNYFQKLLQLQH 361
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 1.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 197 PTVFENYVADIEVDGKQVELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSV 349
P +FE+ I+ G V+L LW AG+ E DR+ P + LM F +
Sbjct: 1162 PFIFEDVERAIDPSGTNVDL-LWRAAGKFELLDRILPKLFLTGHKTLMFFQM 1212
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 2.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 159 ISRHVLPHAPSPTITNFLRIAAIGPED 79
I H+LP+ TITNF R+ G D
Sbjct: 188 IENHLLPNELPLTITNFFRLGTPGFTD 214
>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 3.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 MAAIRKKLVIVGDGACGKT-CLLIVFSKDQFPEVYVPTVFENYVADIEV 235
M K L I+G G T C +FS++ + ++ E ++ DIEV
Sbjct: 214 MHCFHKLLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEV 262
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 25.0 bits (52), Expect = 4.1
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 183 RKYTCRQCLRITLPTSKWMENKWNWL 260
++++CRQ + + S WM+ +W+
Sbjct: 455 QRFSCRQLYGLAVQASMWMQIPCDWV 480
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 5.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 82 RFWLIXAEYWLYRHFF*SSLLIT 14
R W I A Y+L+R F SL T
Sbjct: 707 RLWRIVARYYLWRRHFAESLNAT 729
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 180 N*SLLNTISRHVLPHAPSPTITNFLRIAAIGPE 82
N L N +S+H + P T+ FLR PE
Sbjct: 355 NDDLQNLLSKHRISRIPMSTVNAFLRAEDSIPE 387
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 23.8 bits (49), Expect = 9.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 292 IVIFLASGIPQSQFHLFSIHFDVGNVILKHCRHVYFRELILAEH 161
++I G+P Q H H ++GN + H + Y I AE+
Sbjct: 487 LLIHQIHGLPSEQVHGLLSHTELGNAM--HNQPTYNESSIAAEN 528
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 314 DTRAAAADRNLLGQRYPTEPVPLVFH 237
D AA NL+ QRY T P +F+
Sbjct: 182 DIEAAIETYNLMSQRYFTHASPTLFN 207
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 23.8 bits (49), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 258 ASSTCFPSTSMSAT*FSNTVGTYTSGN*SLLNTISR 151
A C P T S T FS+ V ++GN +TI R
Sbjct: 105 AEEYCDPVTMKSFTRFSHIVAIRSTGNCFSWDTIER 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,627,170
Number of Sequences: 5004
Number of extensions: 32600
Number of successful extensions: 139
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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