BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_B02
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M86667-1|AAC37544.1| 391|Homo sapiens NAP protein. 93 6e-19
BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly pro... 93 6e-19
BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly pro... 93 6e-19
U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly prote... 90 5e-18
BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly pro... 90 5e-18
CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein. 46 1e-04
BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly pro... 46 1e-04
AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly pro... 46 1e-04
AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly Pro... 46 1e-04
D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly prote... 44 4e-04
BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly pro... 44 4e-04
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 44 4e-04
AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly pro... 44 4e-04
>M86667-1|AAC37544.1| 391|Homo sapiens NAP protein.
Length = 391
Score = 93.5 bits (222), Expect = 6e-19
Identities = 53/140 (37%), Positives = 74/140 (52%)
Frame = +3
Query: 231 SLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 410
SLP V+RR+ AL+ L + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 411 DDECLNPWRDDTEEEELARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNIXRNV 590
++EC W+ D EE+E++ ++ A E + KGIP+FW + +NV
Sbjct: 129 EEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-------DPKGIPEFWLTVFKNV 178
Query: 591 SMLSEMMPEHDEPXLKCLQD 650
+LS+M+ EHDEP LK L+D
Sbjct: 179 DLLSDMVQEHDEPILKHLKD 198
>BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 391
Score = 93.5 bits (222), Expect = 6e-19
Identities = 53/140 (37%), Positives = 74/140 (52%)
Frame = +3
Query: 231 SLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 410
SLP V+RR+ AL+ L + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 411 DDECLNPWRDDTEEEELARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNIXRNV 590
++EC W+ D EE+E++ ++ A E + KGIP+FW + +NV
Sbjct: 129 EEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-------DPKGIPEFWLTVFKNV 178
Query: 591 SMLSEMMPEHDEPXLKCLQD 650
+LS+M+ EHDEP LK L+D
Sbjct: 179 DLLSDMVQEHDEPILKHLKD 198
>BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly
protein 1-like 1 protein.
Length = 391
Score = 93.5 bits (222), Expect = 6e-19
Identities = 53/140 (37%), Positives = 74/140 (52%)
Frame = +3
Query: 231 SLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 410
SLP V+RR+ AL+ L + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 411 DDECLNPWRDDTEEEELARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNIXRNV 590
++EC W+ D EE+E++ ++ A E + KGIP+FW + +NV
Sbjct: 129 EEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-------DPKGIPEFWLTVFKNV 178
Query: 591 SMLSEMMPEHDEPXLKCLQD 650
+LS+M+ EHDEP LK L+D
Sbjct: 179 DLLSDMVQEHDEPILKHLKD 198
>U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly protein
2 protein.
Length = 375
Score = 90.2 bits (214), Expect = 5e-18
Identities = 54/141 (38%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Frame = +3
Query: 231 SLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 410
+LP V+RRI AL+ L IEAKFY EVH R + G EP
Sbjct: 58 TLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPT 117
Query: 411 DDECLNPWRDDTEEEE-LARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNIXRN 587
D E + W + EEEE LA +++ + + KGIP+FW+ I RN
Sbjct: 118 DAE--SEWHSENEEEEKLAGDMKSKVVV------TEKAAATAEEPDPKGIPEFWFTIFRN 169
Query: 588 VSMLSEMMPEHDEPXLKCLQD 650
V MLSE++ E+DEP LK LQD
Sbjct: 170 VDMLSELVQEYDEPILKHLQD 190
>BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly
protein 1-like 4 protein.
Length = 375
Score = 90.2 bits (214), Expect = 5e-18
Identities = 54/141 (38%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Frame = +3
Query: 231 SLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 410
+LP V+RRI AL+ L IEAKFY EVH R + G EP
Sbjct: 58 TLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPT 117
Query: 411 DDECLNPWRDDTEEEE-LARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNIXRN 587
D E + W + EEEE LA +++ + + KGIP+FW+ I RN
Sbjct: 118 DAE--SEWHSENEEEEKLAGDMKSKVVV------TEKAAATAEEPDPKGIPEFWFTIFRN 169
Query: 588 VSMLSEMMPEHDEPXLKCLQD 650
V MLSE++ E+DEP LK LQD
Sbjct: 170 VDMLSELVQEYDEPILKHLQD 190
>CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein.
Length = 460
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 LHAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 389
L + + SLP V+ R+ AL+ L ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 390 NGTYEPNDDEC-LNPWRDDTEEEEL 461
N YEP ++EC +D ++EE+
Sbjct: 156 NAIYEPTEEECEYKSDSEDCDDEEM 180
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPDFW + +NV L+ ++ ++DEP LK L D
Sbjct: 238 KGIPDFWLTVLKNVDTLTPLIKKYDEPILKLLTD 271
>BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 460
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 LHAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 389
L + + SLP V+ R+ AL+ L ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 390 NGTYEPNDDEC-LNPWRDDTEEEEL 461
N YEP ++EC +D ++EE+
Sbjct: 156 NAIYEPTEEECEYKSDSEDCDDEEM 180
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPDFW + +NV L+ ++ ++DEP LK L D
Sbjct: 238 KGIPDFWLTVLKNVDTLTPLIKKYDEPILKLLTD 271
>AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly
protein Bpx protein.
Length = 460
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 LHAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 389
L + + SLP V+ R+ AL+ L ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 390 NGTYEPNDDEC-LNPWRDDTEEEEL 461
N YEP ++EC +D ++EE+
Sbjct: 156 NAIYEPTEEECEYKSDSEDCDDEEM 180
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPDFW + +NV L+ ++ ++DEP LK L D
Sbjct: 238 KGIPDFWLTVLKNVDTLTPLIKKYDEPILKLLTD 271
>AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly
Protein 1-like 2 protein.
Length = 460
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 LHAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 389
L + + SLP V+ R+ AL+ L ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 390 NGTYEPNDDEC-LNPWRDDTEEEEL 461
N YEP ++EC +D ++EE+
Sbjct: 156 NAIYEPTEEECEYKSDSEDCDDEEM 180
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPDFW + +NV L+ ++ ++DEP LK L D
Sbjct: 238 KGIPDFWLTVLKNVDTLTPLIKKYDEPILKLLTD 271
>D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly protein
protein.
Length = 506
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +3
Query: 234 LPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 413
LP VR R++ALR + E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 414 DECLNPWRDDTEEEELARAVQNAAITE 494
+EC W + EE VQ+ +E
Sbjct: 160 EEC--EWNSEDEEFSSDEEVQDNTPSE 184
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPD+W + +NV L M+ ++DEP LK L D
Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSD 342
>BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +3
Query: 234 LPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 413
LP VR R++ALR + E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 414 DECLNPWRDDTEEEELARAVQNAAITE 494
+EC W + EE VQ+ +E
Sbjct: 160 EEC--EWNSEDEEFSSDEEVQDNTPSE 184
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPD+W + +NV L M+ ++DEP LK L D
Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSD 342
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +3
Query: 234 LPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 413
LP VR R++ALR + E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 414 DECLNPWRDDTEEEELARAVQNAAITE 494
+EC W + EE VQ+ +E
Sbjct: 160 EEC--EWNSEDEEFSSDEEVQDNTPSE 184
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPD+W + +NV L M+ ++DEP LK L D
Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSD 342
>AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 variant protein.
Length = 506
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +3
Query: 234 LPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 413
LP VR R++ALR + E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 414 DECLNPWRDDTEEEELARAVQNAAITE 494
+EC W + EE VQ+ +E
Sbjct: 160 EEC--EWNSEDEEFSSDEEVQDNTPSE 184
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KGIPD+W + +NV L M+ ++DEP LK L D
Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSD 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,266,972
Number of Sequences: 237096
Number of extensions: 1573345
Number of successful extensions: 6931
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6919
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -