Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_P09
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.84 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.84 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 7   SHHSLSTRDGRLIAAQFII*FNSK*HSRIGLIYLNFLRIISRLL 138
           SH S+  +DG ++A    +  NS   + +G I   F R++S L+
Sbjct: 280 SHRSIDVKDGIVLATGITVHRNSAQQAGVGTI---FDRVLSELV 320


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 7   SHHSLSTRDGRLIAAQFII*FNSK*HSRIGLIYLNFLRIISRLL 138
           SH S+  +DG ++A    +  NS   + +G I   F R++S L+
Sbjct: 280 SHRSIDVKDGIVLATGITVHRNSAQQAGVGTI---FDRVLSELV 320


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 87  ANRTYLFEFPANYKSPSAPVCVKA 158
           A RTYLF+   N      P  V A
Sbjct: 545 AGRTYLFDLDYNESEEQCPYTVDA 568


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 123 YKSPSAPVCVKA*LIQLLLSRAHIFLSI 206
           Y SP++ VC+ A LI L +    +++ I
Sbjct: 621 YISPASQVCIAAALIALQIVLTLVWMII 648


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 123 YKSPSAPVCVKA*LIQLLLSRAHIFLSI 206
           Y SP++ VC+ A LI L +    +++ I
Sbjct: 711 YISPASQVCIAAALIALQIVLTLVWMII 738


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,263
Number of Sequences: 438
Number of extensions: 2958
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)