Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_P02
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 452 PLXDVTPSRKRIRVIQIPL 396
           P   +TP++KRI++ Q PL
Sbjct: 193 PSIRITPAKKRIKLEQSPL 211


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 225 MTMSPLT-GFTPQSTENIALPQMSNYASPRNRTAGKWN*TARG 350
           +T  P   G T +++ +I LP+++   +     AGK+N   RG
Sbjct: 267 LTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRG 309


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 277 RYPRCRITLRPGTVQPENGIEQLGGRYTGKSCRRSFTPPYSGI*MTRIR 423
           +YP  R    P   QP  G+E L    TG       T  +S   + R R
Sbjct: 634 KYPDARAMGYPFDRQPRAGVETLAQFLTGNMAVTEVTVRFSDTIVPRSR 682


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 134 CYIWLVFIFYYY*KTNGRIITRIYGSTRTI 45
           C IWL F+  Y+  T   +  RI   + TI
Sbjct: 858 CVIWLAFVPLYF-GTGNNVALRITSMSVTI 886


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 237 PLTGFTPQSTENIALPQMSNYASPRNRT 320
           P TG  P  T NI L  +     PR+ T
Sbjct: 564 PFTGGDPMKTYNIILKGIDAIEFPRSIT 591


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 102 LLEDEWKNHNKNLWKHA 52
           L E+EW+N N++ ++ A
Sbjct: 341 LEEEEWENENESDYQDA 357


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 134 CYIWLVFIFYYY 99
           C IWL F+  Y+
Sbjct: 716 CIIWLAFVPIYF 727


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 134 CYIWLVFIFYYY 99
           C IWL F+  Y+
Sbjct: 806 CIIWLAFVPIYF 817


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,497
Number of Sequences: 438
Number of extensions: 3409
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)