Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_M17
(428 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 59 5e-09
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 59 5e-09
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 59 5e-09
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 59 5e-09
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 59 5e-09
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 59 5e-09
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 59 5e-09
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 59 5e-09
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 55 9e-08
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 55 9e-08
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 48 2e-05
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 34 0.23
AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens ... 32 0.95
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 31 1.7
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 31 2.2
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 31 2.2
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 31 2.2
BC071599-1|AAH71599.1| 1121|Homo sapiens pleckstrin homology dom... 30 3.8
BC033239-1|AAH33239.1| 748|Homo sapiens PLEKHA7 protein protein. 30 3.8
AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin r... 29 5.1
AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin r... 29 5.1
AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin r... 29 5.1
AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein. 29 5.1
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 29 8.8
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 58.4 bits (135), Expect = 1e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
KTAPFD RFPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 55.2 bits (127), Expect = 9e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 159 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 278
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 52.8 bits (121), Expect = 5e-07
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 68 TAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
T PFDPRFP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2
Query: 65 KTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRK 169
+TAPFD RFPNQNQTR+ +Q Y+D H ++ K
Sbjct: 13 RTAPFDRRFPNQNQTRNGWQKYLDLHHFKKAMTAK 47
Score = 38.7 bits (86), Expect = 0.008
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 180 CYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGR 275
C +++ VY+SLCP W WD+ + F GR
Sbjct: 55 CEWYQHVYKSLCPIPWASAWDDHGQKAHFLGR 86
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 163 AKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 267
+ +T H+T+S T +++P + + +G TS P +PS
Sbjct: 21 SSSTIHSTVSSSTTAITSPFTTAETGVTSTPSSPS 55
>AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ31897 fis, clone NT2RP7004080, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 331
Score = 31.9 bits (69), Expect = 0.95
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 73 TFRPTVP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSG 228
T + +P PK + A PK +PP R FA KNTS+ SR AP++G
Sbjct: 275 TLKEELP-PKEEVA--PK-EEVPPIERAFAQKNTSYQAASRLPRDARAPLAG 322
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 303 KHRERLG-SKSYRRRCLRRAGCPTCRPTHWGRET 205
K R++ G K RR+ LR+A CP+ RP G +T
Sbjct: 58 KGRQKAGLEKGNRRKELRQANCPSLRPQRKGADT 91
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 228 VDKWDNQRAEGTFAGRI 278
V WD QRAEGTF G+I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 172 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 267
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 172 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 267
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>BC071599-1|AAH71599.1| 1121|Homo sapiens pleckstrin homology domain
containing, family A member 7 protein.
Length = 1121
Score = 29.9 bits (64), Expect = 3.8
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = +1
Query: 55 RRPQNSTFRPTVP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGST 234
RRP R TV P ++ L P AR A KN+SH + R S P G
Sbjct: 585 RRPHTPAERVTVKPPDQRRSVDISLGDSPRRARGHAVKNSSH--VDRR----SMPSMGYM 638
Query: 235 SGTTSAP 255
+ T SAP
Sbjct: 639 THTVSAP 645
>BC033239-1|AAH33239.1| 748|Homo sapiens PLEKHA7 protein protein.
Length = 748
Score = 29.9 bits (64), Expect = 3.8
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = +1
Query: 55 RRPQNSTFRPTVP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGST 234
RRP R TV P ++ L P AR A KN+SH + R S P G
Sbjct: 211 RRPHTPAERVTVKPPDQRRSVDISLGDSPRRARGHAVKNSSH--VDRR----SMPSMGYM 264
Query: 235 SGTTSAP 255
+ T SAP
Sbjct: 265 THTVSAP 271
>AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 261
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 261
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 261
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein.
Length = 635
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 139 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 261
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 210 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 250
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 121 PKLRGLPPXARKFAAKNTSHA-TISR-ECTGLSAPMSGSTSGTTSAPK 258
P LR PP R +T A TIS +C+ L + + ST GT PK
Sbjct: 15 PALRPCPPPLRGRPGSSTELAPTISHYDCSPLDSTATPSTPGTAPPPK 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,583,303
Number of Sequences: 237096
Number of extensions: 1169447
Number of successful extensions: 7889
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7887
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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