Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_L18
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    27   0.21 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    27   0.21 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    27   0.21 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.28 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.28 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.0  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 177 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 293
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 177 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 293
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 177 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 293
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 647 VINVPPRNSQLPRSA--SIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSQ 504
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSSQ
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 647 VINVPPRNSQLPRSA--SIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSQ 504
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSSQ
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 511 QARGPMLMPDVNPN 470
           Q RGPM   D NPN
Sbjct: 854 QQRGPMTNDDFNPN 867


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 272 NWWFQSILKAVDKGLKI 222
           NW  Q ++K+++KG ++
Sbjct: 841 NWSNQDVIKSIEKGYRL 857


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 505 WLEYVSVVDPSIIITALLGTTLVF 576
           +L  V ++ P+ ++  LLG  L+F
Sbjct: 290 FLLVVEIIPPTSLVVPLLGKYLIF 313


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 505 WLEYVSVVDPSIIITALLGTTLVF 576
           +L  V ++ P+ ++  LLG  L+F
Sbjct: 290 FLLVVEIIPPTSLVVPLLGKYLIF 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,990
Number of Sequences: 438
Number of extensions: 3791
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)