Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K02
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC055429-1|AAH55429.1|  628|Homo sapiens junctophilin 4 protein.       30   8.3  
AL834411-1|CAD39073.1|  295|Homo sapiens hypothetical protein pr...    30   8.3  
AK055345-1|BAB70905.1|  221|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AB058734-1|BAB47460.1|  663|Homo sapiens KIAA1831 protein protein.     30   8.3  

>BC055429-1|AAH55429.1|  628|Homo sapiens junctophilin 4 protein.
          Length = 628

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 301 EELSEPTTTLQPAQQSSESPLLSGVGFVLLMTIVINAAWLL 423
           EEL EP  T +PAQ  + +PL+ G   +L +++    + LL
Sbjct: 587 EELGEPAATERPAQPGAANPLVVGAVALLDLSLAFLFSQLL 627


>AL834411-1|CAD39073.1|  295|Homo sapiens hypothetical protein
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 301 EELSEPTTTLQPAQQSSESPLLSGVGFVLLMTIVINAAWLL 423
           EEL EP  T +PAQ  + +PL+ G   +L +++    + LL
Sbjct: 254 EELGEPAATERPAQPGAANPLVVGAVALLDLSLAFLFSQLL 294


>AK055345-1|BAB70905.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30783 fis, clone FEBRA2000880, weakly similar to
           SARCALUMENIN PRECURSOR. ).
          Length = 221

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 301 EELSEPTTTLQPAQQSSESPLLSGVGFVLLMTIVINAAWLL 423
           EEL EP  T +PAQ  + +PL+ G   +L +++    + LL
Sbjct: 180 EELGEPAATERPAQPGAANPLVVGAVALLDLSLAFLFSQLL 220


>AB058734-1|BAB47460.1|  663|Homo sapiens KIAA1831 protein protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 301 EELSEPTTTLQPAQQSSESPLLSGVGFVLLMTIVINAAWLL 423
           EEL EP  T +PAQ  + +PL+ G   +L +++    + LL
Sbjct: 622 EELGEPAATERPAQPGAANPLVVGAVALLDLSLAFLFSQLL 662


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,467,592
Number of Sequences: 237096
Number of extensions: 1823800
Number of successful extensions: 7315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7315
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)